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Yufeng Wu
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Method
:
ScisTree2 enables large-scale inference of cell lineage trees and genotype calling using efficient local search
Haotian Zhang
,
Yiming Zhang
,
Teng Gao
,
and
Yufeng Wu
Genome Res.
December 2025
35
:
2781
-
2791
;
Published in Advance
September 3, 2025
,
doi:
10.1101/gr.280542.125
Abstract
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Method
:
A fast and scalable method for inferring phylogenetic networks from trees by aligning lineage taxon strings
Louxin Zhang
,
Niloufar Abhari
,
Caroline Colijn
,
and
Yufeng Wu
Genome Res.
July 2023
33
:
1053
-
1060
;
Published in Advance
May 22, 2023
,
doi:
10.1101/gr.277669.123
Abstract
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Research
:
Characterization of functional relationships of R-loops with gene transcription and epigenetic modifications in rice
Yuan Fang
,
Lifen Chen
,
Kande Lin
,
Yilong Feng
,
Pengyue Zhang
,
Xiucai Pan
,
Jennifer Sanders
,
Yufeng Wu
,
Xiu-e Wang
,
Zhen Su
,
Caiyan Chen
,
Hairong Wei
,
and
Wenli Zhang
Genome Res.
August 2019
29
:
1287
-
1297
;
Published in Advance
July 1, 2019
,
doi:
10.1101/gr.246009.118
Abstract
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Research
:
Maize centromeres expand and adopt a uniform size in the genetic background of oat
Kai Wang
,
Yufeng Wu
,
Wenli Zhang
,
R. Kelly Dawe
,
and
Jiming Jiang
Genome Res.
January 2014
24
:
107
-
116
;
Published in Advance
October 7, 2013
,
doi:
10.1101/gr.160887.113
Abstract
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Resource
:
High-resolution mapping of open chromatin in the rice genome
Wenli Zhang
,
Yufeng Wu
,
James C. Schnable
,
Zixian Zeng
,
Michael Freeling
,
Gregory E. Crawford
,
and
Jiming Jiang
Genome Res.
January 2012
22
:
151
-
162
;
Published in Advance
November 22, 2011
,
doi:
10.1101/gr.131342.111
Abstract
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Single-cell gene signature scoring
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