Searching journal content for Yuan Y.C. Chen in author.

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  1. Research: Single-cell transcriptome and metagenome profiling reveals the genetic basis of rumen functions and convergent developmental patterns in ruminants
    • Juan Deng,
    • Ya-Jing Liu,
    • Wen-Tian Wei,
    • Qi-Xuan Huang,
    • Li-Ping Zhao,
    • Ling-Yun Luo,
    • Qi Zhu,
    • Lin Zhang,
    • Yuan Chen,
    • Yan-Ling Ren,
    • Shan-Gang Jia,
    • Yu-Luan Lin,
    • Ji Yang,
    • Feng-Hua Lv,
    • Hong-Ping Zhang,
    • Feng-E Li,
    • Li Li,
    • and Meng-Hua Li
    Genome Res. October 2023 33: 1690-1707; Published in Advance October 26, 2023, doi:10.1101/gr.278239.123
    OPEN ACCESS ARTICLE
  2. Research: Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans
    • Christopher A. Desjardins,
    • Charles Giamberardino,
    • Sean M. Sykes,
    • Chen-Hsin Yu,
    • Jennifer L. Tenor,
    • Yuan Chen,
    • Timothy Yang,
    • Alexander M. Jones,
    • Sheng Sun,
    • Miriam R. Haverkamp,
    • Joseph Heitman,
    • Anastasia P. Litvintseva,
    • John R. Perfect,
    • and Christina A. Cuomo
    Genome Res. July 2017 27: 1207-1219; Published in Advance June 13, 2017, doi:10.1101/gr.218727.116
    OPEN ACCESS ARTICLE
  3. Research: Widespread exon skipping triggers degradation by nuclear RNA surveillance in fission yeast
    • Danny A. Bitton,
    • Sophie R. Atkinson,
    • Charalampos Rallis,
    • Graeme C. Smith,
    • David A. Ellis,
    • Yuan Y.C. Chen,
    • Michal Malecki,
    • Sandra Codlin,
    • Jean-François Lemay,
    • Cristina Cotobal,
    • François Bachand,
    • Samuel Marguerat,
    • Juan Mata,
    • and Jürg Bähler
    Genome Res. June 2015 25: 884-896; Published in Advance April 16, 2015, doi:10.1101/gr.185371.114
    OPEN ACCESS ARTICLE
  4. Method: LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq
    • Danny A. Bitton,
    • Charalampos Rallis,
    • Daniel C. Jeffares,
    • Graeme C. Smith,
    • Yuan Y.C. Chen,
    • Sandra Codlin,
    • Samuel Marguerat,
    • and Jürg Bähler
    Genome Res. July 2014 24: 1169-1179; Published in Advance April 7, 2014, doi:10.1101/gr.166819.113
    OPEN ACCESS ARTICLE
  5. Resource: A calibrated human Y-chromosomal phylogeny based on resequencing
    • Wei Wei,
    • Qasim Ayub,
    • Yuan Chen,
    • Shane McCarthy,
    • Yiping Hou,
    • Ignazio Carbone,
    • Yali Xue,
    • and Chris Tyler-Smith
    Genome Res. February 2013 23: 388-395; Published in Advance October 4, 2012, doi:10.1101/gr.143198.112
    OPEN ACCESS ARTICLE
  6. ENSEMBL Special: An Overview of Ensembl
    • Ewan Birney,
    • T. Daniel Andrews,
    • Paul Bevan,
    • Mario Caccamo,
    • Yuan Chen,
    • Laura Clarke,
    • Guy Coates,
    • James Cuff,
    • Val Curwen,
    • Tim Cutts,
    • Thomas Down,
    • Eduardo Eyras,
    • Xose M. Fernandez-Suarez,
    • Paul Gane,
    • Brian Gibbins,
    • James Gilbert,
    • Martin Hammond,
    • Hans-Rudolf Hotz,
    • Vivek Iyer,
    • Kerstin Jekosch,
    • Andreas Kahari,
    • Arek Kasprzyk,
    • Damian Keefe,
    • Stephen Keenan,
    • Heikki Lehvaslaiho,
    • Graham McVicker,
    • Craig Melsopp,
    • Patrick Meidl,
    • Emmanuel Mongin,
    • Roger Pettett,
    • Simon Potter,
    • Glenn Proctor,
    • Mark Rae,
    • Steve Searle,
    • Guy Slater,
    • Damian Smedley,
    • James Smith,
    • Will Spooner,
    • Arne Stabenau,
    • James Stalker,
    • Roy Storey,
    • Abel Ureta-Vidal,
    • K. Cara Woodwark,
    • Graham Cameron,
    • Richard Durbin,
    • Anthony Cox,
    • Tim Hubbard,
    • and Michele Clamp
    Genome Res. May 2004 14: 925-928; Published in Advance April 12, 2004, doi:10.1101/gr.1860604
  7. RESOURCE: A SNP Resource for Human Chromosome 22: Extracting Dense Clusters of SNPs From the Genomic Sequence
    • Elisabeth Dawson,
    • Yuan Chen,
    • Sarah Hunt,
    • Luc J. Smink,
    • Adrienne Hunt,
    • Kate Rice,
    • Simon Livingston,
    • Suzannah Bumpstead,
    • Richard Bruskiewich,
    • Pak Sham,
    • Rocky Ganske,
    • Mark Adams,
    • Kazuhiko Kawasaki,
    • Nobuyoshi Shimizu,
    • Shinsei Minoshima,
    • Bruce Roe,
    • David Bentley,
    • and Ian Dunham
    Genome Res. January 1, 2001 11: 170-178; doi:10.1101/gr.156901
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