Searching journal content for Yu Chen in author.

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  1. Method: Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies
    • Tsung-Kai Hung,
    • Wan-Chi Liu,
    • Sheng-Kai Lai,
    • Hui-Wen Chuang,
    • Yi-Che Lee,
    • Hong-Ye Lin,
    • Chia-Lang Hsu,
    • Chien-Yu Chen,
    • Ya-Chien Yang,
    • Jacob Shujui Hsu,
    • and Pei-Lung Chen
    Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
    OPEN ACCESS ARTICLE
  2. Research: SWATH-MS-based proteogenomic analysis reveals the involvement of alternative splicing in poplar upon lead stress
    • Fu-Yuan Zhu,
    • Xin Chen,
    • Yu-Chen Song,
    • Lydia Pui Ying Lam,
    • Yuki Tobimatsu,
    • Bei Gao,
    • Mo-Xian Chen,
    • and Fu-Liang Cao
    Genome Res. March 2023 33: 371-385; Published in Advance March 24, 2023, doi:10.1101/gr.277473.122
  3. Method: TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes
    • Liguo Zhang,
    • Yang Zhang,
    • Yu Chen,
    • Omid Gholamalamdari,
    • Yuchuan Wang,
    • Jian Ma,
    • and Andrew S. Belmont
    Genome Res. February 2021 31: 251-264; Published in Advance December 18, 2020, doi:10.1101/gr.266239.120
  4. Research: Active retrotransposons help maintain pericentromeric heterochromatin required for faithful cell division
    • Yajing Hao,
    • Dongpeng Wang,
    • Shuheng Wu,
    • Xiao Li,
    • Changwei Shao,
    • Peng Zhang,
    • Jia-Yu Chen,
    • Do-Hwan Lim,
    • Xiang-Dong Fu,
    • Runsheng Chen,
    • and Shunmin He
    Genome Res. November 2020 30: 1570-1582; Published in Advance October 15, 2020, doi:10.1101/gr.256131.119
  5. Research: Genome-wide, integrative analysis of circular RNA dysregulation and the corresponding circular RNA-microRNA-mRNA regulatory axes in autism
    • Yen-Ju Chen,
    • Chia-Ying Chen,
    • Te-Lun Mai,
    • Chih-Fan Chuang,
    • Yu-Chen Chen,
    • Sachin Kumar Gupta,
    • Laising Yen,
    • Yi-Da Wang,
    • and Trees-Juen Chuang
    Genome Res. March 2020 30: 375-391; Published in Advance March 3, 2020, doi:10.1101/gr.255463.119
    OPEN ACCESS ARTICLE
  6. Research: Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans
    • Christopher A. Desjardins,
    • Charles Giamberardino,
    • Sean M. Sykes,
    • Chen-Hsin Yu,
    • Jennifer L. Tenor,
    • Yuan Chen,
    • Timothy Yang,
    • Alexander M. Jones,
    • Sheng Sun,
    • Miriam R. Haverkamp,
    • Joseph Heitman,
    • Anastasia P. Litvintseva,
    • John R. Perfect,
    • and Christina A. Cuomo
    Genome Res. July 2017 27: 1207-1219; Published in Advance June 13, 2017, doi:10.1101/gr.218727.116
    OPEN ACCESS ARTICLE
  7. Resource: Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach
    • Pablo Meyer,
    • Geoffrey Siwo,
    • Danny Zeevi,
    • Eilon Sharon,
    • Raquel Norel,
    • DREAM6 Promoter Prediction Consortium,
    • Eran Segal,
    • and Gustavo Stolovitzky
    Genome Res. November 2013 23: 1928-1937; Published in Advance August 15, 2013, doi:10.1101/gr.157420.113
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