Searching journal content for Yongjun Zhao in author.

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  1. Research: Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    • Eugene Berezikov,
    • Nicolas Robine,
    • Anastasia Samsonova,
    • Jakub O. Westholm,
    • Ammar Naqvi,
    • Jui-Hung Hung,
    • Katsutomo Okamura,
    • Qi Dai,
    • Diane Bortolamiol-Becet,
    • Raquel Martin,
    • Yongjun Zhao,
    • Phillip D. Zamore,
    • Gregory J. Hannon,
    • Marco A. Marra,
    • Zhiping Weng,
    • Norbert Perrimon,
    • and Eric C. Lai
    Genome Res. February 2011 21: 203-215; Published in Advance December 22, 2010, doi:10.1101/gr.116657.110
    OPEN ACCESS ARTICLE
  2. Research: Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver
    • Brad G. Hoffman,
    • Gordon Robertson,
    • Bogard Zavaglia,
    • Mike Beach,
    • Rebecca Cullum,
    • Sam Lee,
    • Galina Soukhatcheva,
    • Leping Li,
    • Elizabeth D. Wederell,
    • Nina Thiessen,
    • Mikhail Bilenky,
    • Timothee Cezard,
    • Angela Tam,
    • Baljit Kamoh,
    • Inanc Birol,
    • Derek Dai,
    • YongJun Zhao,
    • Martin Hirst,
    • C. Bruce Verchere,
    • Cheryl D. Helgason,
    • Marco A. Marra,
    • Steven J.M. Jones,
    • and Pamela A. Hoodless
    Genome Res. August 2010 20: 1037-1051; Published in Advance June 15, 2010, doi:10.1101/gr.104356.109
    OPEN ACCESS ARTICLE
  3. Research: The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance
    • Santosh S. Atanur,
    • İnanç Birol,
    • Victor Guryev,
    • Martin Hirst,
    • Oliver Hummel,
    • Catherine Morrissey,
    • Jacques Behmoaras,
    • Xose M. Fernandez-Suarez,
    • Michelle D. Johnson,
    • William M. McLaren,
    • Giannino Patone,
    • Enrico Petretto,
    • Charles Plessy,
    • Kathleen S. Rockland,
    • Charles Rockland,
    • Kathrin Saar,
    • Yongjun Zhao,
    • Piero Carninci,
    • Paul Flicek,
    • Ted Kurtz,
    • Edwin Cuppen,
    • Michal Pravenec,
    • Norbert Hubner,
    • Steven J.M. Jones,
    • Ewan Birney,
    • and Timothy J. Aitman
    Genome Res. June 2010 20: 791-803; Published in Advance April 29, 2010, doi:10.1101/gr.103499.109
  4. Methods: Next-generation tag sequencing for cancer gene expression profiling
    • A. Sorana Morrissy,
    • Ryan D. Morin,
    • Allen Delaney,
    • Thomas Zeng,
    • Helen McDonald,
    • Steven Jones,
    • Yongjun Zhao,
    • Martin Hirst,
    • and Marco A. Marra
    Genome Res. October 2009 19: 1825-1835; Published in Advance June 18, 2009, doi:10.1101/gr.094482.109
  5. LETTER: Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding
    • A. Gordon Robertson,
    • Mikhail Bilenky,
    • Angela Tam,
    • Yongjun Zhao,
    • Thomas Zeng,
    • Nina Thiessen,
    • Timothee Cezard,
    • Anthony P. Fejes,
    • Elizabeth D. Wederell,
    • Rebecca Cullum,
    • Ghia Euskirchen,
    • Martin Krzywinski,
    • Inanc Birol,
    • Michael Snyder,
    • Pamela A. Hoodless,
    • Martin Hirst,
    • Marco A. Marra,
    • and Steven J.M. Jones
    Genome Res. December 2008 18: 1906-1917; Published in Advance September 11, 2008, doi:10.1101/gr.078519.108
    OPEN ACCESS ARTICLE
  6. LETTER: In-depth characterization of the microRNA transcriptome in a leukemia progression model
    • Florian Kuchenbauer,
    • Ryan D. Morin,
    • Bob Argiropoulos,
    • Oleh I. Petriv,
    • Malachi Griffith,
    • Michael Heuser,
    • Eric Yung,
    • Jessica Piper,
    • Allen Delaney,
    • Anna-Liisa Prabhu,
    • Yongjun Zhao,
    • Helen McDonald,
    • Thomas Zeng,
    • Martin Hirst,
    • Carl L. Hansen,
    • Marco A. Marra,
    • and R. Keith Humphries
    Genome Res. November 2008 18: 1787-1797; Published in Advance October 10, 2008, doi:10.1101/gr.077578.108
  7. Methods: Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    • Ryan D. Morin,
    • Michael D. O’Connor,
    • Malachi Griffith,
    • Florian Kuchenbauer,
    • Allen Delaney,
    • Anna-Liisa Prabhu,
    • Yongjun Zhao,
    • Helen McDonald,
    • Thomas Zeng,
    • Martin Hirst,
    • Connie J. Eaves,
    • and Marco A. Marra
    Genome Res. April 2008 18: 610-621; Published in Advance February 19, 2008, doi:10.1101/gr.7179508
  8. Methods: Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines
    • Jaswinder Khattra,
    • Allen D. Delaney,
    • Yongjun Zhao,
    • Asim Siddiqui,
    • Jennifer Asano,
    • Helen McDonald,
    • Pawan Pandoh,
    • Noreen Dhalla,
    • Anna-liisa Prabhu,
    • Kevin Ma,
    • Stephanie Lee,
    • Adrian Ally,
    • Angela Tam,
    • Danne Sa,
    • Sean Rogers,
    • David Charest,
    • Jeff Stott,
    • Scott Zuyderduyn,
    • Richard Varhol,
    • Connie Eaves,
    • Steven Jones,
    • Robert Holt,
    • Martin Hirst,
    • Pamela A. Hoodless,
    • and Marco A. Marra
    Genome Res. January 2007 17: 108-116; Published in Advance November 29, 2006, doi:10.1101/gr.5488207
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