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Yang Zhang
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Method
:
TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes
Liguo Zhang
,
Yang Zhang
,
Yu Chen
,
Omid Gholamalamdari
,
Yuchuan Wang
,
Jian Ma
,
and
Andrew S. Belmont
Genome Res.
February 2021
31
:
251
-
264
;
Published in Advance
December 18, 2020
,
doi:
10.1101/gr.266239.120
Abstract
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Method
:
MOCHI enables discovery of heterogeneous interactome modules in 3D nucleome
Dechao Tian
,
Ruochi Zhang
,
Yang Zhang
,
Xiaopeng Zhu
,
and
Jian Ma
Genome Res.
February 2020
30
:
227
-
238
;
Published in Advance
January 6, 2020
,
doi:
10.1101/gr.250316.119
Abstract
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Research
:
Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks
Marta Farré
,
Jaebum Kim
,
Anastasia A. Proskuryakova
,
Yang Zhang
,
Anastasia I. Kulemzina
,
Qiye Li
,
Yang Zhou
,
Yingqi Xiong
,
Jennifer L. Johnson
,
Polina L. Perelman
,
Warren E. Johnson
,
Wesley C. Warren
,
Anna V. Kukekova
,
Guojie Zhang
,
Stephen J. O'Brien
,
Oliver A. Ryder
,
Alexander S. Graphodatsky
,
Jian Ma
,
Harris A. Lewin
,
and
Denis M. Larkin
Genome Res.
April 2019
29
:
576
-
589
;
Published in Advance
February 13, 2019
,
doi:
10.1101/gr.239863.118
Abstract
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Research
:
Critical threshold levels of DNA methyltransferase 1 are required to maintain DNA methylation across the genome in human cancer cells
Yi Cai
,
Hsing-Chen Tsai
,
Ray-Whay Chiu Yen
,
Yang W. Zhang
,
Xiangqian Kong
,
Wei Wang
,
Limin Xia
,
and
Stephen B. Baylin
Genome Res.
April 2017
27
:
533
-
544
;
Published in Advance
February 23, 2017
,
doi:
10.1101/gr.208108.116
Abstract
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Resource
:
Diverse alternative back-splicing and alternative splicing landscape of circular RNAs
Xiao-Ou Zhang
,
Rui Dong
,
Yang Zhang
,
Jia-Lin Zhang
,
Zheng Luo
,
Jun Zhang
,
Ling-Ling Chen
,
and
Li Yang
Genome Res.
September 2016
26
:
1277
-
1287
;
Published in Advance
June 30, 2016
,
doi:
10.1101/gr.202895.115
Abstract
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Single-cell gene signature scoring
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Spectral component approach for recent population structure
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