Searching journal content for Y Guo in author.

Displaying results 1-10 of 14
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  1. Method: High-fidelity bidirectional translation between single-cell transcriptomes and DNA methylomes with scBOND
    • Kehan Lang,
    • Chenyang Jia,
    • Siyu Li,
    • Yi Guo,
    • Dingjun Hu,
    • and Shengquan Chen
    Genome Res. March 26, 2026 ; Published in Advance March 26, 2026, doi:10.1101/gr.281350.125
    OPEN ACCESS ARTICLE
  2. Method: Restoring the potency of neutralizing antibody via guided hypermutation with hyper-antibody editor
    • Yuhong Wang,
    • Yuefeng Guo,
    • Qiuyu Lu,
    • Xinyi Liu,
    • Haoqi Xu,
    • Jiayi Chen,
    • Ruiqi Pi,
    • Shaopeng Yuan,
    • Ziting Yang,
    • Rusen Lu,
    • Fei-Long Meng,
    • Tingting Gan,
    • and Jiazhi Hu
    Genome Res. March 19, 2026 gr.281396.125; Published in Advance March 19, 2026, doi:10.1101/gr.281396.125
    ACCEPTED MANUSCRIPT
  3. Corrigendum: Corrigendum: Machine learning identifies activation of RUNX/AP-1 as drivers of mesenchymal and fibrotic regulatory programs in gastric cancer
    • Milad Razavi-Mohseni,
    • Weitai Huang,
    • Yu A. Guo,
    • Dustin Shigaki,
    • Shamaine Wei Ting Ho,
    • Patrick Tan,
    • Anders J. Skanderup,
    • and Michael A. Beer
    Genome Res. February 2026 36: 432; doi:10.1101/gr.281294.125
    OPEN ACCESS ARTICLE
  4. Research: Machine learning identifies activation of RUNX/AP-1 as drivers of mesenchymal and fibrotic regulatory programs in gastric cancer
    • Milad Razavi-Mohseni,
    • Weitai Huang,
    • Yu A. Guo,
    • Dustin Shigaki,
    • Shamaine Wei Ting Ho,
    • Patrick Tan,
    • Anders J. Skanderup,
    • and Michael A. Beer
    Genome Res. May 2024 34: 680-695; Published in Advance May 22, 2024, doi:10.1101/gr.278565.123
  5. Method: Surveying mutation density patterns around specific genomic features
    • Hui Yu,
    • Scott Ness,
    • Chung-I Li,
    • Yongsheng Bai,
    • Peng Mao,
    • and Yan Guo
    Genome Res. October 2022 32: 1930-1940; Published in Advance September 13, 2022, doi:10.1101/gr.276770.122
  6. Research: Chromatin architecture transitions from zebrafish sperm through early embryogenesis
    • Candice L. Wike,
    • Yixuan Guo,
    • Mengyao Tan,
    • Ryohei Nakamura,
    • Dana Klatt Shaw,
    • Noelia Díaz,
    • Aneasha F. Whittaker-Tademy,
    • Neva C. Durand,
    • Erez Lieberman Aiden,
    • Juan M. Vaquerizas,
    • David Grunwald,
    • Hiroyuki Takeda,
    • and Bradley R. Cairns
    Genome Res. June 2021 31: 981-994; Published in Advance May 18, 2021, doi:10.1101/gr.269860.120
    OPEN ACCESS ARTICLE
  7. Method: A novel k-mer set memory (KSM) motif representation improves regulatory variant prediction
    • Yuchun Guo,
    • Kevin Tian,
    • Haoyang Zeng,
    • Xiaoyun Guo,
    • and David Kenneth Gifford
    Genome Res. June 2018 28: 891-900; Published in Advance April 13, 2018, doi:10.1101/gr.226852.117
  8. Research: ZFX acts as a transcriptional activator in multiple types of human tumors by binding downstream from transcription start sites at the majority of CpG island promoters
    • Suhn Kyong Rhie,
    • Lijun Yao,
    • Zhifei Luo,
    • Heather Witt,
    • Shannon Schreiner,
    • Yu Guo,
    • Andrew A. Perez,
    • and Peggy J. Farnham
    Genome Res. March 2018 28: 310-320; Published in Advance February 2, 2018, doi:10.1101/gr.228809.117
    OPEN ACCESS ARTICLE
  9. Erratum: Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles
    • Tannistha Nandi,
    • Matthew T.G. Holden,
    • Xavier Didelot,
    • Kurosh Mehershahi,
    • Justin A. Boddey,
    • Ifor Beacham,
    • Ian Peak,
    • John Harting,
    • Primo Baybayan,
    • Yan Guo,
    • Susana Wang,
    • Lee Chee How,
    • Bernice Sim,
    • Angela Essex-Lopresti,
    • Mitali Sarkar-Tyson,
    • Michelle Nelson,
    • Sophie Smither,
    • Catherine Ong,
    • Lay Tin Aw,
    • Chua Hui Hoon,
    • Stephen Michell,
    • David J. Studholme,
    • Richard Titball,
    • Swaine L. Chen,
    • Julian Parkhill,
    • and Patrick Tan
    Genome Res. April 2015 25: 608
    OPEN ACCESS ARTICLE
  10. Research: Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles
    • Tannistha Nandi,
    • Matthew T.G. Holden,
    • Xavier Didelot,
    • Kurosh Mehershahi,
    • Justin A. Boddey,
    • Ifor Beacham,
    • Ian Peak,
    • John Harting,
    • Primo Baybayan,
    • Yan Guo,
    • Susana Wang,
    • Lee Chee How,
    • Bernice Sim,
    • Angela Essex-Lopresti,
    • Mitali Sarkar-Tyson,
    • Michelle Nelson,
    • Sophie Smither,
    • Catherine Ong,
    • Lay Tin Aw,
    • Chua Hui Hoon,
    • Stephen Michell,
    • David J. Studholme,
    • Richard Titball,
    • Swaine L. Chen,
    • Julian Parkhill,
    • and Patrick Tan
    Genome Res. January 2015 25: 129-141; Published in Advance September 18, 2014, doi:10.1101/gr.177543.114
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