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Xin Gao
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Research
:
Epigenetic drift score captures directional methylation variability and links aging to transcriptional, metabolic, and genetic alterations
Xiu Fan
,
Qili Qian
,
Wenran Li
,
Tianzi Liu
,
Changqing Zeng
,
Peilin Jia
,
Huandong Lin
,
Xin Gao
,
Li Jin
,
Mingfeng Xia
,
Sijia Wang
,
and
Fan Liu
Genome Res.
October 2025
35
:
2173
-
2188
;
Published in Advance
August 1, 2025
,
doi:
10.1101/gr.280155.124
Abstract
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Method
:
A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data
Siyuan Chen
,
Jiuming Wang
,
Inkyung Jung
,
Zhaowen Qiu
,
Xin Gao
,
and
Yu Li
Genome Res.
August 2024
34
:
1174
-
1184
;
Published in Advance
August 13, 2024
,
doi:
10.1101/gr.279274.124
Abstract
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Method
:
Accurate transcriptome-wide identification and quantification of alternative polyadenylation from RNA-seq data with APAIQ
Yongkang Long
,
Bin Zhang
,
Shuye Tian
,
Jia Jia Chan
,
Juexiao Zhou
,
Zhongxiao Li
,
Yisheng Li
,
Zheng An
,
Xingyu Liao
,
Yu Wang
,
Shiwei Sun
,
Ying Xu
,
Yvonne Tay
,
Wei Chen
,
and
Xin Gao
Genome Res.
April 2023
33
:
644
-
657
;
Published in Advance
April 28, 2023
,
doi:
10.1101/gr.277177.122
Abstract
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Method
:
TransBorrow: genome-guided transcriptome assembly by borrowing assemblies from different assemblers
Ting Yu
,
Zengchao Mu
,
Zhaoyuan Fang
,
Xiaoping Liu
,
Xin Gao
,
and
Juntao Liu
Genome Res.
August 2020
30
:
1181
-
1190
;
Published in Advance
August 17, 2020
,
doi:
10.1101/gr.257766.119
Abstract
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Research
:
The subgenomes show asymmetric expression of alleles in hybrid lineages of
Megalobrama amblycephala
×
Culter alburnus
Li Ren
,
Wuhui Li
,
Qinbo Qin
,
He Dai
,
Fengming Han
,
Jun Xiao
,
Xin Gao
,
Jialin Cui
,
Chang Wu
,
Xiaojing Yan
,
Guoliang Wang
,
Guiming Liu
,
Jia Liu
,
Jiaming Li
,
Zhong Wan
,
Conghui Yang
,
Chun Zhang
,
Min Tao
,
Jing Wang
,
Kaikun Luo
,
Shi Wang
,
Fangzhou Hu
,
Rurong Zhao
,
Xuming Li
,
Min Liu
,
Hongkun Zheng
,
Rong Zhou
,
Yuqin Shu
,
Yude Wang
,
Qinfeng Liu
,
Chenchen Tang
,
Wei Duan
,
and
Shaojun Liu
Genome Res.
November 2019
29
:
1805
-
1815
;
Published in Advance
October 24, 2019
,
doi:
10.1101/gr.249805.119
Abstract
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March 2026, 36 (3)
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Single-cell gene signature scoring
Chromosome engineering in 8p syndrome
Convergent evolution in arid rodents
Short tandem repeat genotyping using long reads
Spectral component approach for recent population structure
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