Searching journal content for Xiaoyun Xing in author.

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  1. Resource: Charting the regulatory landscape of TP53 on transposable elements in cancer
    • Xuan Qu,
    • Yonghao Liang,
    • Colin McCornack,
    • Xiaoyun Xing,
    • Heather Schmidt,
    • Chad Tomlinson,
    • Catrina Fronick,
    • Edward A. Belter, Jr.,
    • Juan F. Macias-Velasco,
    • and Ting Wang
    Genome Res. June 2025 35: 1456-1471; Published in Advance May 13, 2025, doi:10.1101/gr.279398.124
    OPEN ACCESS ARTICLE
  2. Resource: Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution
    • Yujie Chen,
    • Yiran Hou,
    • Qinglin Zeng,
    • Irene Wang,
    • Meiru Shang,
    • Kwangdeok Shin,
    • Christopher Hemauer,
    • Xiaoyun Xing,
    • Junsu Kang,
    • Guoyan Zhao,
    • and Ting Wang
    Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
    OPEN ACCESS ARTICLE
  3. Research: Widespread contribution of transposable elements to the innovation of gene regulatory networks
    • Vasavi Sundaram,
    • Yong Cheng,
    • Zhihai Ma,
    • Daofeng Li,
    • Xiaoyun Xing,
    • Peter Edge,
    • Michael P. Snyder,
    • and Ting Wang
    Genome Res. December 2014 24: 1963-1976; Published in Advance October 15, 2014, doi:10.1101/gr.168872.113
  4. Method: Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm
    • Bo Zhang,
    • Yan Zhou,
    • Nan Lin,
    • Rebecca F. Lowdon,
    • Chibo Hong,
    • Raman P. Nagarajan,
    • Jeffrey B. Cheng,
    • Daofeng Li,
    • Michael Stevens,
    • Hyung Joo Lee,
    • Xiaoyun Xing,
    • Jia Zhou,
    • Vasavi Sundaram,
    • GiNell Elliott,
    • Junchen Gu,
    • Taoping Shi,
    • Philippe Gascard,
    • Mahvash Sigaroudinia,
    • Thea D. Tlsty,
    • Theresa Kadlecek,
    • Arthur Weiss,
    • Henriette O’Geen,
    • Peggy J. Farnham,
    • Cécile L. Maire,
    • Keith L. Ligon,
    • Pamela A.F. Madden,
    • Angela Tam,
    • Richard Moore,
    • Martin Hirst,
    • Marco A. Marra,
    • Baoxue Zhang,
    • Joseph F. Costello,
    • and Ting Wang
    Genome Res. September 2013 23: 1522-1540; Published in Advance June 26, 2013, doi:10.1101/gr.156539.113
    OPEN ACCESS ARTICLE
  5. LETTER: Computational identification and functional validation of regulatory motifs in cartilage-expressed genes
    • Sherri R. Davies,
    • Li-Wei Chang,
    • Debabrata Patra,
    • Xiaoyun Xing,
    • Karen Posey,
    • Jacqueline Hecht,
    • Gary D. Stormo,
    • and Linda J. Sandell
    Genome Res. October 2007 17: 1438-1447; Published in Advance September 4, 2007, doi:10.1101/gr.6224007
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