Searching journal content for William J. Murphy in author.

Displaying results 1-10 of 16
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  1. Mini-Review: Toward telomere-to-telomere cat genomes for precision medicine and conservation biology
    • William J. Murphy and
    • Andrew J. Harris
    Genome Res. May 2024 34: 655-664; Published in Advance June 7, 2024, doi:10.1101/gr.278546.123
  2. Research: Genomic architecture constrained placental mammal X Chromosome evolution
    • Wesley A. Brashear,
    • Kevin R. Bredemeyer,
    • and William J. Murphy
    Genome Res. August 2021 31: 1353-1365; Published in Advance July 22, 2021, doi:10.1101/gr.275274.121
  3. Research: Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages
    • Jennifer F. Hughes,
    • Helen Skaletsky,
    • Tatyana Pyntikova,
    • Natalia Koutseva,
    • Terje Raudsepp,
    • Laura G. Brown,
    • Daniel W. Bellott,
    • Ting-Jan Cho,
    • Shannon Dugan-Rocha,
    • Ziad Khan,
    • Colin Kremitzki,
    • Catrina Fronick,
    • Tina A. Graves-Lindsay,
    • Lucinda Fulton,
    • Wesley C. Warren,
    • Richard K. Wilson,
    • Elaine Owens,
    • James E. Womack,
    • William J. Murphy,
    • Donna M. Muzny,
    • Kim C. Worley,
    • Bhanu P. Chowdhary,
    • Richard A. Gibbs,
    • and David C. Page
    Genome Res. December 2020 30: 1716-1726; Published in Advance November 18, 2020, doi:10.1101/gr.269902.120
  4. Research: Evolutionary conservation of Y Chromosome ampliconic gene families despite extensive structural variation
    • Wesley A. Brashear,
    • Terje Raudsepp,
    • and William J. Murphy
    Genome Res. December 2018 28: 1841-1851; Published in Advance October 31, 2018, doi:10.1101/gr.237586.118
  5. Research: Phylogenomic evidence for ancient hybridization in the genomes of living cats (Felidae)
    • Gang Li,
    • Brian W. Davis,
    • Eduardo Eizirik,
    • and William J. Murphy
    Genome Res. January 2016 26: 1-11; Published in Advance October 30, 2015, doi:10.1101/gr.186668.114
  6. Research: Comparative analysis of mammalian Y chromosomes illuminates ancestral structure and lineage-specific evolution
    • Gang Li,
    • Brian W. Davis,
    • Terje Raudsepp,
    • Alison J. Pearks Wilkerson,
    • Victor C. Mason,
    • Malcolm Ferguson-Smith,
    • Patricia C. O'Brien,
    • Paul D. Waters,
    • and William J. Murphy
    Genome Res. September 2013 23: 1486-1495; Published in Advance June 20, 2013, doi:10.1101/gr.154286.112
  7. Method: Efficient cross-species capture hybridization and next-generation sequencing of mitochondrial genomes from noninvasively sampled museum specimens
    • Victor C. Mason,
    • Gang Li,
    • Kristofer M. Helgen,
    • and William J. Murphy
    Genome Res. October 2011 21: 1695-1704; Published in Advance August 31, 2011, doi:10.1101/gr.120196.111
  8. Letter: Ecological adaptation determines functional mammalian olfactory subgenomes
    • Sara Hayden,
    • Michaël Bekaert,
    • Tess A. Crider,
    • Stefano Mariani,
    • William J. Murphy,
    • and Emma C. Teeling
    Genome Res. January 2010 20: 1-9; Published in Advance December 1, 2009, doi:10.1101/gr.099416.109
  9. LETTER: The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)
    • Webb Miller,
    • Daniela I. Drautz,
    • Jan E. Janecka,
    • Arthur M. Lesk,
    • Aakrosh Ratan,
    • Lynn P. Tomsho,
    • Mike Packard,
    • Yeting Zhang,
    • Lindsay R. McClellan,
    • Ji Qi,
    • Fangqing Zhao,
    • M. Thomas P. Gilbert,
    • Love Dalén,
    • Juan Luis Arsuaga,
    • Per G.P. Ericson,
    • Daniel H. Huson,
    • Kristofer M. Helgen,
    • William J. Murphy,
    • Anders Götherström,
    • and Stephan C. Schuster
    Genome Res. February 2009 19: 213-220; Published in Advance January 12, 2009, doi:10.1101/gr.082628.108
    OPEN ACCESS ARTICLE
  10. RESOURCE: 28-Way vertebrate alignment and conservation track in the UCSC Genome Browser
    • Webb Miller,
    • Kate Rosenbloom,
    • Ross C. Hardison,
    • Minmei Hou,
    • James Taylor,
    • Brian Raney,
    • Richard Burhans,
    • David C. King,
    • Robert Baertsch,
    • Daniel Blankenberg,
    • Sergei L. Kosakovsky Pond,
    • Anton Nekrutenko,
    • Belinda Giardine,
    • Robert S. Harris,
    • Svitlana Tyekucheva,
    • Mark Diekhans,
    • Thomas H. Pringle,
    • William J. Murphy,
    • Arthur Lesk,
    • George M. Weinstock,
    • Kerstin Lindblad-Toh,
    • Richard A. Gibbs,
    • Eric S. Lander,
    • Adam Siepel,
    • David Haussler,
    • and W. James Kent
    Genome Res. December 2007 17: 1797-1808; Published in Advance November 5, 2007, doi:10.1101/gr.6761107
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