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Vincent Daubin
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Method
:
Genome-scale coestimation of species and gene trees
Bastien Boussau
,
Gergely J. Szöllősi
,
Laurent Duret
,
Manolo Gouy
,
Eric Tannier
,
and
Vincent Daubin
Genome Res.
February 2013
23
:
323
-
330
;
Published in Advance
November 6, 2012
,
doi:
10.1101/gr.141978.112
Abstract
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Letter
:
Complete genome of the cellulolytic thermophile
Acidothermus cellulolyticus
11B provides insights into its ecophysiological and evolutionary adaptations
Ravi D. Barabote
,
Gary Xie
,
David H. Leu
,
Philippe Normand
,
Anamaria Necsulea
,
Vincent Daubin
,
Claudine Médigue
,
William S. Adney
,
Xin Clare Xu
,
Alla Lapidus
,
Rebecca E. Parales
,
Chris Detter
,
Petar Pujic
,
David Bruce
,
Celine Lavire
,
Jean F. Challacombe
,
Thomas S. Brettin
,
and
Alison M. Berry
Genome Res.
June 2009
19
:
1033
-
1043
;
Published in Advance
March 6, 2009
,
doi:
10.1101/gr.084848.108
Abstract
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ARTICLE
:
Genome characteristics of facultatively symbiotic
Frankia
sp. strains reflect host range and host plant biogeography
Philippe Normand
,
Pascal Lapierre
,
Louis S. Tisa
,
Johann Peter Gogarten
,
Nicole Alloisio
,
Emilie Bagnarol
,
Carla A. Bassi
,
Alison M. Berry
,
Derek M. Bickhart
,
Nathalie Choisne
,
Arnaud Couloux
,
Benoit Cournoyer
,
Stephane Cruveiller
,
Vincent Daubin
,
Nadia Demange
,
Maria Pilar Francino
,
Eugene Goltsman
,
Ying Huang
,
Olga R. Kopp
,
Laurent Labarre
,
Alla Lapidus
,
Celine Lavire
,
Joelle Marechal
,
Michele Martinez
,
Juliana E. Mastronunzio
,
Beth C. Mullin
,
James Niemann
,
Pierre Pujic
,
Tania Rawnsley
,
Zoe Rouy
,
Chantal Schenowitz
,
Anita Sellstedt
,
Fernando Tavares
,
Jeffrey P. Tomkins
,
David Vallenet
,
Claudio Valverde
,
Luis G. Wall
,
Ying Wang
,
Claudine Medigue
,
and
David R. Benson
Genome Res.
January 2007
17
:
7
-
15
;
Published in Advance
December 6, 2006
,
doi:
10.1101/gr.5798407
Abstract
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LETTER
:
Bacterial Genomes as New Gene Homes: The Genealogy of ORFans in
E. coli
Vincent Daubin
and
Howard Ochman
Genome Res.
June 2004
14
:
1036
-
1042
;
doi:
10.1101/gr.2231904
Abstract
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LETTER
:
A Phylogenomic Approach to Bacterial Phylogeny: Evidence of a Core of Genes Sharing a Common History
Vincent Daubin
,
Manolo Gouy
,
and
Guy Perrière
Genome Res.
July 1, 2002
12
:
1080
-
1090
;
doi:
10.1101/gr.187002
Abstract
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