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Valerie A. Schneider
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Displaying results 1-4 of
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:
Gaps and complex structurally variant loci in phased genome assemblies
David Porubsky
,
Mitchell R. Vollger
,
William T. Harvey
,
Allison N. Rozanski
,
Peter Ebert
,
Glenn Hickey
,
Patrick Hasenfeld
,
Ashley D. Sanders
,
Catherine Stober
,
Human Pangenome Reference Consortium
,
Jan O. Korbel
,
Benedict Paten
,
Tobias Marschall
,
and
Evan E. Eichler
Genome Res.
April 2023
33
:
496
-
510
;
Published in Advance
May 10, 2023
,
doi:
10.1101/gr.277334.122
Abstract
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:
Accessing NCBI data using the NCBI Sequence Viewer and Genome Data Viewer (GDV)
Sanjida H. Rangwala
,
Anatoliy Kuznetsov
,
Victor Ananiev
,
Andrea Asztalos
,
Evgeny Borodin
,
Vladislav Evgeniev
,
Victor Joukov
,
Vadim Lotov
,
Ravinder Pannu
,
Dmitry Rudnev
,
Andrew Shkeda
,
Eric M. Weitz
,
and
Valerie A. Schneider
Genome Res.
January 2021
31
:
159
-
169
;
Published in Advance
November 25, 2020
,
doi:
10.1101/gr.266932.120
Abstract
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:
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
Valerie A. Schneider
,
Tina Graves-Lindsay
,
Kerstin Howe
,
Nathan Bouk
,
Hsiu-Chuan Chen
,
Paul A. Kitts
,
Terence D. Murphy
,
Kim D. Pruitt
,
Françoise Thibaud-Nissen
,
Derek Albracht
,
Robert S. Fulton
,
Milinn Kremitzki
,
Vincent Magrini
,
Chris Markovic
,
Sean McGrath
,
Karyn Meltz Steinberg
,
Kate Auger
,
William Chow
,
Joanna Collins
,
Glenn Harden
,
Timothy Hubbard
,
Sarah Pelan
,
Jared T. Simpson
,
Glen Threadgold
,
James Torrance
,
Jonathan M. Wood
,
Laura Clarke
,
Sergey Koren
,
Matthew Boitano
,
Paul Peluso
,
Heng Li
,
Chen-Shan Chin
,
Adam M. Phillippy
,
Richard Durbin
,
Richard K. Wilson
,
Paul Flicek
,
Evan E. Eichler
,
and
Deanna M. Church
Genome Res.
May 2017
27
:
849
-
864
;
Published in Advance
April 10, 2017
,
doi:
10.1101/gr.213611.116
Abstract
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Resource
:
Single haplotype assembly of the human genome from a hydatidiform mole
Karyn Meltz Steinberg
,
Valerie A. Schneider
,
Tina A. Graves-Lindsay
,
Robert S. Fulton
,
Richa Agarwala
,
John Huddleston
,
Sergey A. Shiryev
,
Aleksandr Morgulis
,
Urvashi Surti
,
Wesley C. Warren
,
Deanna M. Church
,
Evan E. Eichler
,
and
Richard K. Wilson
Genome Res.
December 2014
24
:
2066
-
2076
;
Published in Advance
November 4, 2014
,
doi:
10.1101/gr.180893.114
Abstract
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Single-cell gene signature scoring
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