Searching journal content for Shiaw-Pyng Yang in author.

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  1. Resource: Assemblathon 1: A competitive assessment of de novo short read assembly methods
    • Dent Earl,
    • Keith Bradnam,
    • John St. John,
    • Aaron Darling,
    • Dawei Lin,
    • Joseph Fass,
    • Hung On Ken Yu,
    • Vince Buffalo,
    • Daniel R. Zerbino,
    • Mark Diekhans,
    • Ngan Nguyen,
    • Pramila Nuwantha Ariyaratne,
    • Wing-Kin Sung,
    • Zemin Ning,
    • Matthias Haimel,
    • Jared T. Simpson,
    • Nuno A. Fonseca,
    • İnanç Birol,
    • T. Roderick Docking,
    • Isaac Y. Ho,
    • Daniel S. Rokhsar,
    • Rayan Chikhi,
    • Dominique Lavenier,
    • Guillaume Chapuis,
    • Delphine Naquin,
    • Nicolas Maillet,
    • Michael C. Schatz,
    • David R. Kelley,
    • Adam M. Phillippy,
    • Sergey Koren,
    • Shiaw-Pyng Yang,
    • Wei Wu,
    • Wen-Chi Chou,
    • Anuj Srivastava,
    • Timothy I. Shaw,
    • J. Graham Ruby,
    • Peter Skewes-Cox,
    • Miguel Betegon,
    • Michelle T. Dimon,
    • Victor Solovyev,
    • Igor Seledtsov,
    • Petr Kosarev,
    • Denis Vorobyev,
    • Ricardo Ramirez-Gonzalez,
    • Richard Leggett,
    • Dan MacLean,
    • Fangfang Xia,
    • Ruibang Luo,
    • Zhenyu Li,
    • Yinlong Xie,
    • Binghang Liu,
    • Sante Gnerre,
    • Iain MacCallum,
    • Dariusz Przybylski,
    • Filipe J. Ribeiro,
    • Shuangye Yin,
    • Ted Sharpe,
    • Giles Hall,
    • Paul J. Kersey,
    • Richard Durbin,
    • Shaun D. Jackman,
    • Jarrod A. Chapman,
    • Xiaoqiu Huang,
    • Joseph L. DeRisi,
    • Mario Caccamo,
    • Yingrui Li,
    • David B. Jaffe,
    • Richard E. Green,
    • David Haussler,
    • Ian Korf,
    • and Benedict Paten
    Genome Res. December 2011 21: 2224-2241; Published in Advance September 16, 2011, doi:10.1101/gr.126599.111
    OPEN ACCESS ARTICLE
  2. Methods: Detecting heterozygosity in shotgun genome assemblies: Lessons from obligately outcrossing nematodes
    • Antoine Barrière,
    • Shiaw-Pyng Yang,
    • Elizabeth Pekarek,
    • Cristel G. Thomas,
    • Eric S. Haag,
    • and Ilya Ruvinsky
    Genome Res. March 2009 19: 470-480; Published in Advance February 9, 2009, doi:10.1101/gr.081851.108
  3. Methods: Physical map-assisted whole-genome shotgun sequence assemblies
    • René L. Warren,
    • Dmitry Varabei,
    • Darren Platt,
    • Xiaoqiu Huang,
    • David Messina,
    • Shiaw-Pyng Yang,
    • James W. Kronstad,
    • Martin Krzywinski,
    • Wesley C. Warren,
    • John W. Wallis,
    • LaDeana W. Hillier,
    • Asif T. Chinwalla,
    • Jacqueline E. Schein,
    • Asim S. Siddiqui,
    • Marco A. Marra,
    • Richard K. Wilson,
    • and Steven J.M. Jones
    Genome Res. June 2006 16: 768-775; doi:10.1101/gr.5090606
  4. Methods: PCAP: A Whole-Genome Assembly Program
    • Xiaoqiu Huang,
    • Jianmin Wang,
    • Srinivas Aluru,
    • Shiaw-Pyng Yang,
    • and LaDeana Hillier
    Genome Res. September 2003 13: 2164-2170; doi:10.1101/gr.1390403
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