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Shan Yang
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Displaying results 1-7 of
7
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Methods
:
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding
Kevin Judd McKernan
,
Heather E. Peckham
,
Gina L. Costa
,
Stephen F. McLaughlin
,
Yutao Fu
,
Eric F. Tsung
,
Christopher R. Clouser
,
Cisyla Duncan
,
Jeffrey K. Ichikawa
,
Clarence C. Lee
,
Zheng Zhang
,
Swati S. Ranade
,
Eileen T. Dimalanta
,
Fiona C. Hyland
,
Tanya D. Sokolsky
,
Lei Zhang
,
Andrew Sheridan
,
Haoning Fu
,
Cynthia L. Hendrickson
,
Bin Li
,
Lev Kotler
,
Jeremy R. Stuart
,
Joel A. Malek
,
Jonathan M. Manning
,
Alena A. Antipova
,
Damon S. Perez
,
Michael P. Moore
,
Kathleen C. Hayashibara
,
Michael R. Lyons
,
Robert E. Beaudoin
,
Brittany E. Coleman
,
Michael W. Laptewicz
,
Adam E. Sannicandro
,
Michael D. Rhodes
,
Rajesh K. Gottimukkala
,
Shan Yang
,
Vineet Bafna
,
Ali Bashir
,
Andrew MacBride
,
Can Alkan
,
Jeffrey M. Kidd
,
Evan E. Eichler
,
Martin G. Reese
,
Francisco M. De La Vega
,
and
Alan P. Blanchard
Genome Res.
September 2009
19
:
1527
-
1541
;
Published in Advance
June 22, 2009
,
doi:
10.1101/gr.091868.109
Abstract
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LETTER
:
Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions
Laurie Gordon
,
Shan Yang
,
Mary Tran-Gyamfi
,
Dan Baggott
,
Mari Christensen
,
Aaron Hamilton
,
Richard Crooijmans
,
Martien Groenen
,
Susan Lucas
,
Ivan Ovcharenko
,
and
Lisa Stubbs
Genome Res.
November 2007
17
:
1603
-
1613
;
Published in Advance
October 5, 2007
,
doi:
10.1101/gr.6775107
Abstract
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RESOURCE
:
A comprehensive catalog of human KRAB-associated zinc finger genes: Insights into the evolutionary history of a large family of transcriptional repressors
Stuart Huntley
,
Daniel M. Baggott
,
Aaron T. Hamilton
,
Mary Tran-Gyamfi
,
Shan Yang
,
Joomyeong Kim
,
Laurie Gordon
,
Elbert Branscomb
,
and
Lisa Stubbs
Genome Res.
May 2006
16
:
669
-
677
;
Published in Advance
April 10, 2006
,
doi:
10.1101/gr.4842106
Abstract
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LETTER
:
Insertions and Deletions Are Male Biased Too: A Whole-Genome Analysis in Rodents
Kateryna D. Makova
,
Shan Yang
,
and
Francesca Chiaromonte
Genome Res.
April 2004
14
:
567
-
573
;
doi:
10.1101/gr.1971104
Abstract
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ARTICLE
:
Patterns of Insertions and Their Covariation With Substitutions in the Rat, Mouse, and Human Genomes
Shan Yang
,
Arian F. Smit
,
Scott Schwartz
,
Francesca Chiaromonte
,
Krishna M. Roskin
,
David Haussler
,
Webb Miller
,
and
Ross C. Hardison
Genome Res.
April 2004
14
:
517
-
527
;
doi:
10.1101/gr.1984404
Abstract
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ARTICLE
:
Covariation in Frequencies of Substitution, Deletion, Transposition, and Recombination During Eutherian Evolution
Ross C. Hardison
,
Krishna M. Roskin
,
Shan Yang
,
Mark Diekhans
,
W. James Kent
,
Ryan Weber
,
Laura Elnitski
,
Jia Li
,
Michael O'Connor
,
Diana Kolbe
,
Scott Schwartz
,
Terrence S. Furey
,
Simon Whelan
,
Nick Goldman
,
Arian Smit
,
Webb Miller
,
Francesca Chiaromonte
,
and
David Haussler
Genome Res.
January 1, 2003
13
:
13
-
26
;
doi:
10.1101/gr.844103
Abstract
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LETTER
:
Distinguishing Regulatory DNA From Neutral Sites
Laura Elnitski
,
Ross C. Hardison
,
Jia Li
,
Shan Yang
,
Diana Kolbe
,
Pallavi Eswara
,
Michael J. O'Connor
,
Scott Schwartz
,
Webb Miller
,
and
Francesca Chiaromonte
Genome Res.
January 1, 2003
13
:
64
-
72
;
doi:
10.1101/gr.817703
Abstract
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