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S Cheng
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Displaying results 1-8 of
8
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:
Exploring the epigenome profiles of repetitive elements with the WashU Repeat Browser
Jiawei Shen
,
Siyuan Cheng
,
Deepak Purushotham
,
Xiaoyu Zhuo
,
Alan Y Du
,
Wenjin Zhang
,
Daofeng Li
,
and
Ting Wang
Genome Res.
February 21, 2025
gr.279764.124
;
Published in Advance
February 21, 2025
,
doi:
10.1101/gr.279764.124
Abstract
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Research
:
Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations
Yasine Malki
,
Guannan Kang
,
W.K. Jacky Lam
,
Qing Zhou
,
Suk Hang Cheng
,
Peter P.H. Cheung
,
Jinyue Bai
,
Ming Lok Chan
,
Chui Ting Lee
,
Wenlei Peng
,
Yiqiong Zhang
,
Wanxia Gai
,
Winsome W.S. Wong
,
Mary-Jane L. Ma
,
Wenshuo Li
,
Xinzhou Xu
,
Zhuoran Gao
,
Irene O.L. Tse
,
Huimin Shang
,
L.Y. Lois Choy
,
Peiyong Jiang
,
K.C. Allen Chan
,
and
Y.M. Dennis Lo
Genome Res.
January 2025
35
:
31
-
42
;
Published in Advance
November 27, 2024
,
doi:
10.1101/gr.279667.124
Abstract
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Research
:
Genomic origin, fragmentomics, and transcriptional properties of long cell-free DNA molecules in human plasma
Huiwen Che
,
Peiyong Jiang
,
L.Y. Lois Choy
,
Suk Hang Cheng
,
Wenlei Peng
,
Rebecca W.Y. Chan
,
Jing Liu
,
Qing Zhou
,
W.K. Jacky Lam
,
Stephanie C.Y. Yu
,
So Ling Lau
,
Tak Y. Leung
,
John Wong
,
Vincent Wai-Sun Wong
,
Grace L.H. Wong
,
Stephen L. Chan
,
K.C. Allen Chan
,
and
Y.M. Dennis Lo
Genome Res.
February 2024
34
:
189
-
200
;
Published in Advance
February 26, 2024
,
doi:
10.1101/gr.278556.123
Abstract
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Method
:
Detection and characterization of jagged ends of double-stranded DNA in plasma
Peiyong Jiang
,
Tingting Xie
,
Spencer C. Ding
,
Ze Zhou
,
Suk Hang Cheng
,
Rebecca W.Y. Chan
,
Wing-Shan Lee
,
Wenlei Peng
,
John Wong
,
Vincent W.S. Wong
,
Henry L.Y. Chan
,
Stephen L. Chan
,
Liona C.Y. Poon
,
Tak Y. Leung
,
K.C. Allen Chan
,
Rossa W.K. Chiu
,
and
Y.M. Dennis Lo
Genome Res.
August 2020
30
:
1144
-
1153
;
Published in Advance
August 14, 2020
,
doi:
10.1101/gr.261396.120
Abstract
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Method
:
Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin
Kun Sun
,
Peiyong Jiang
,
Suk Hang Cheng
,
Timothy H.T. Cheng
,
John Wong
,
Vincent W.S. Wong
,
Simon S.M. Ng
,
Brigette B.Y. Ma
,
Tak Y. Leung
,
Stephen L. Chan
,
Tony S.K. Mok
,
Paul B.S. Lai
,
Henry L.Y. Chan
,
Hao Sun
,
K.C. Allen Chan
,
Rossa W.K. Chiu
,
and
Y.M. Dennis Lo
Genome Res.
March 2019
29
:
418
-
427
;
Published in Advance
February 26, 2019
,
doi:
10.1101/gr.242719.118
Abstract
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LETTER
:
A Multilocus Genotyping Assay for Candidate Markers of Cardiovascular Disease Risk
Suzanne Cheng
,
Michael A. Grow
,
Céline Pallaud
,
William Klitz
,
Henry A. Erlich
,
Sophia Visvikis
,
John J. Chen
,
Clive R. Pullinger
,
Mary J. Malloy
,
Gérard Siest
,
and
John P. Kane
Genome Res.
October 1, 1999
9
:
936
-
949
;
doi:
10.1101/gr.9.10.936
Abstract
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ARTICLES
:
Generation of entire human papillomavirus genomes by long PCR: frequency of errors produced during amplification.
A C Stewart
,
P E Gravitt
,
S Cheng
,
and
C M Wheeler
Genome Res.
August 1995
5
:
79
-
88
;
doi:
10.1101/gr.5.1.79
Abstract
Full Text (PDF)
References
ARTICLE
:
Template integrity is essential for PCR amplification of 20- to 30-kb sequences from genomic DNA.
S Cheng
,
Y Chen
,
J A Monforte
,
R Higuchi
,
and
B Van Houten
Genome Res.
April 1995
4
:
294
-
298
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