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Rory Johnson
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8
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Method
:
Enhancing CRISPR deletion via pharmacological delay of DNA-PKcs
Núria Bosch-Guiteras
,
Tina Uroda
,
Hugo A. Guillen-Ramirez
,
Rahel Riedo
,
Amiq Gazdhar
,
Roberta Esposito
,
Carlos Pulido-Quetglas
,
Yitzhak Zimmer
,
Michaela Medová
,
and
Rory Johnson
Genome Res.
March 2021
31
:
461
-
471
;
Published in Advance
February 11, 2021
,
doi:
10.1101/gr.265736.120
Abstract
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Research
:
Ancient exapted transposable elements promote nuclear enrichment of human long noncoding RNAs
Joana Carlevaro-Fita
,
Taisia Polidori
,
Monalisa Das
,
Carmen Navarro
,
Tatjana I. Zoller
,
and
Rory Johnson
Genome Res.
February 2019
29
:
208
-
222
;
Published in Advance
December 26, 2018
,
doi:
10.1101/gr.229922.117
Abstract
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Research
:
Evolution of selenophosphate synthetases: emergence and relocation of function through independent duplications and recurrent subfunctionalization
Marco Mariotti
,
Didac Santesmasses
,
Salvador Capella-Gutierrez
,
Andrea Mateo
,
Carme Arnan
,
Rory Johnson
,
Salvatore D'Aniello
,
Sun Hee Yim
,
Vadim N. Gladyshev
,
Florenci Serras
,
Montserrat Corominas
,
Toni Gabaldón
,
and
Roderic Guigó
Genome Res.
September 2015
25
:
1256
-
1267
;
Published in Advance
July 20, 2015
,
doi:
10.1101/gr.190538.115
Abstract
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Research
:
Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia
Pedro G. Ferreira
,
Pedro Jares
,
Daniel Rico
,
Gonzalo Gómez-López
,
Alejandra Martínez-Trillos
,
Neus Villamor
,
Simone Ecker
,
Abel González-Pérez
,
David G. Knowles
,
Jean Monlong
,
Rory Johnson
,
Victor Quesada
,
Sarah Djebali
,
Panagiotis Papasaikas
,
Mónica López-Guerra
,
Dolors Colomer
,
Cristina Royo
,
Maite Cazorla
,
Magda Pinyol
,
Guillem Clot
,
Marta Aymerich
,
Maria Rozman
,
Marta Kulis
,
David Tamborero
,
Anaïs Gouin
,
Julie Blanc
,
Marta Gut
,
Ivo Gut
,
Xose S. Puente
,
David G. Pisano
,
José Ignacio Martin-Subero
,
Nuria López-Bigas
,
Armando López-Guillermo
,
Alfonso Valencia
,
Carlos López-Otín
,
Elías Campo
,
and
Roderic Guigó
Genome Res.
February 2014
24
:
212
-
226
;
Published in Advance
November 21, 2013
,
doi:
10.1101/gr.152132.112
Abstract
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Research
:
Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs
Hagen Tilgner
,
David G. Knowles
,
Rory Johnson
,
Carrie A. Davis
,
Sudipto Chakrabortty
,
Sarah Djebali
,
João Curado
,
Michael Snyder
,
Thomas R. Gingeras
,
and
Roderic Guigó
Genome Res.
September 2012
22
:
1616
-
1625
;
doi:
10.1101/gr.134445.111
Abstract
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Resource
:
The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
Thomas Derrien
,
Rory Johnson
,
Giovanni Bussotti
,
Andrea Tanzer
,
Sarah Djebali
,
Hagen Tilgner
,
Gregory Guernec
,
David Martin
,
Angelika Merkel
,
David G. Knowles
,
Julien Lagarde
,
Lavanya Veeravalli
,
Xiaoan Ruan
,
Yijun Ruan
,
Timo Lassmann
,
Piero Carninci
,
James B. Brown
,
Leonard Lipovich
,
Jose M. Gonzalez
,
Mark Thomas
,
Carrie A. Davis
,
Ramin Shiekhattar
,
Thomas R. Gingeras
,
Tim J. Hubbard
,
Cedric Notredame
,
Jennifer Harrow
,
and
Roderic Guigó
Genome Res.
September 2012
22
:
1775
-
1789
;
doi:
10.1101/gr.132159.111
Abstract
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Research
:
Chimeras taking shape: Potential functions of proteins encoded by chimeric RNA transcripts
Milana Frenkel-Morgenstern
,
Vincent Lacroix
,
Iakes Ezkurdia
,
Yishai Levin
,
Alexandra Gabashvili
,
Jaime Prilusky
,
Angela del Pozo
,
Michael Tress
,
Rory Johnson
,
Roderic Guigo
,
and
Alfonso Valencia
Genome Res.
July 2012
22
:
1231
-
1242
;
Published in Advance
May 15, 2012
,
doi:
10.1101/gr.130062.111
Abstract
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Research
:
Coassembly of REST and its cofactors at sites of gene repression in embryonic stem cells
Hong-Bing Yu
,
Rory Johnson
,
Galih Kunarso
,
and
Lawrence W. Stanton
Genome Res.
August 2011
21
:
1284
-
1293
;
Published in Advance
June 1, 2011
,
doi:
10.1101/gr.114488.110
Abstract
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