Searching journal content for Rayan Chikhi in author.

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  1. Method: Efficient mapping of accurate long reads in minimizer space with mapquik
    • Bariş Ekim,
    • Kristoffer Sahlin,
    • Paul Medvedev,
    • Bonnie Berger,
    • and Rayan Chikhi
    Genome Res. July 2023 33: 1188-1197; Published in Advance June 30, 2023, doi:10.1101/gr.277679.123
    OPEN ACCESS ARTICLE
  2. Review: Data structures based on k-mers for querying large collections of sequencing data sets
    • Camille Marchet,
    • Christina Boucher,
    • Simon J. Puglisi,
    • Paul Medvedev,
    • Mikaël Salson,
    • and Rayan Chikhi
    Genome Res. January 2021 31: 1-12; Published in Advance December 16, 2020, doi:10.1101/gr.260604.119
  3. Method: A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y
    • Marta Tomaszkiewicz,
    • Samarth Rangavittal,
    • Monika Cechova,
    • Rebeca Campos Sanchez,
    • Howard W. Fescemyer,
    • Robert Harris,
    • Danling Ye,
    • Patricia C.M. O'Brien,
    • Rayan Chikhi,
    • Oliver A. Ryder,
    • Malcolm A. Ferguson-Smith,
    • Paul Medvedev,
    • and Kateryna D. Makova
    Genome Res. April 2016 26: 530-540; Published in Advance March 2, 2016, doi:10.1101/gr.199448.115
    OPEN ACCESS ARTICLE
  4. Resource: Assemblathon 1: A competitive assessment of de novo short read assembly methods
    • Dent Earl,
    • Keith Bradnam,
    • John St. John,
    • Aaron Darling,
    • Dawei Lin,
    • Joseph Fass,
    • Hung On Ken Yu,
    • Vince Buffalo,
    • Daniel R. Zerbino,
    • Mark Diekhans,
    • Ngan Nguyen,
    • Pramila Nuwantha Ariyaratne,
    • Wing-Kin Sung,
    • Zemin Ning,
    • Matthias Haimel,
    • Jared T. Simpson,
    • Nuno A. Fonseca,
    • İnanç Birol,
    • T. Roderick Docking,
    • Isaac Y. Ho,
    • Daniel S. Rokhsar,
    • Rayan Chikhi,
    • Dominique Lavenier,
    • Guillaume Chapuis,
    • Delphine Naquin,
    • Nicolas Maillet,
    • Michael C. Schatz,
    • David R. Kelley,
    • Adam M. Phillippy,
    • Sergey Koren,
    • Shiaw-Pyng Yang,
    • Wei Wu,
    • Wen-Chi Chou,
    • Anuj Srivastava,
    • Timothy I. Shaw,
    • J. Graham Ruby,
    • Peter Skewes-Cox,
    • Miguel Betegon,
    • Michelle T. Dimon,
    • Victor Solovyev,
    • Igor Seledtsov,
    • Petr Kosarev,
    • Denis Vorobyev,
    • Ricardo Ramirez-Gonzalez,
    • Richard Leggett,
    • Dan MacLean,
    • Fangfang Xia,
    • Ruibang Luo,
    • Zhenyu Li,
    • Yinlong Xie,
    • Binghang Liu,
    • Sante Gnerre,
    • Iain MacCallum,
    • Dariusz Przybylski,
    • Filipe J. Ribeiro,
    • Shuangye Yin,
    • Ted Sharpe,
    • Giles Hall,
    • Paul J. Kersey,
    • Richard Durbin,
    • Shaun D. Jackman,
    • Jarrod A. Chapman,
    • Xiaoqiu Huang,
    • Joseph L. DeRisi,
    • Mario Caccamo,
    • Yingrui Li,
    • David B. Jaffe,
    • Richard E. Green,
    • David Haussler,
    • Ian Korf,
    • and Benedict Paten
    Genome Res. December 2011 21: 2224-2241; Published in Advance September 16, 2011, doi:10.1101/gr.126599.111
    OPEN ACCESS ARTICLE
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