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R. Wilder Scott
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.
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Method
:
Benchmarking bulk and single-cell variant-calling approaches on Chromium scRNA-seq and scATAC-seq libraries
Matthew Wiens
,
Hossein Farahani
,
R. Wilder Scott
,
T. Michael Underhill
,
and
Ali Bashashati
Genome Res.
August 2024
34
:
1196
-
1210
;
Published in Advance
August 15, 2024
,
doi:
10.1101/gr.277066.122
Abstract
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Method
:
Genomic loci susceptible to systematic sequencing bias in clinical whole genomes
Timothy M. Freeman
,
Genomics England Research Consortium
,
Dennis Wang
,
and
Jason Harris
Genome Res.
March 2020
30
:
415
-
426
;
Published in Advance
March 10, 2020
,
doi:
10.1101/gr.255349.119
Abstract
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Method
:
Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses
Yiming Kang
,
Nikhil R. Patel
,
Christian Shively
,
Pamela Samantha Recio
,
Xuhua Chen
,
Bernd J. Wranik
,
Griffin Kim
,
R. Scott McIsaac
,
Robi Mitra
,
and
Michael R. Brent
Genome Res.
March 2020
30
:
459
-
471
;
Published in Advance
February 14, 2020
,
doi:
10.1101/gr.259655.119
Abstract
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Research
:
Late-replicating heterochromatin is characterized by decreased cytosine methylation in the human genome
Masako Suzuki
,
Mayumi Oda
,
María-Paz Ramos
,
Marién Pascual
,
Kevin Lau
,
Edyta Stasiek
,
Frederick Agyiri
,
Reid F. Thompson
,
Jacob L. Glass
,
Qiang Jing
,
Richard Sandstrom
,
Melissa J. Fazzari
,
R. Scott Hansen
,
John A. Stamatoyannopoulos
,
Andrew S. McLellan
,
and
John M. Greally
Genome Res.
November 2011
21
:
1833
-
1840
;
Published in Advance
September 28, 2011
,
doi:
10.1101/gr.116509.110
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LETTER
:
MicroRNAs and other small RNAs enriched in the
Arabidopsis
RNA-dependent RNA polymerase
-
2 mutant
Cheng Lu
,
Karthik Kulkarni
,
Frédéric F. Souret
,
Ramesh MuthuValliappan
,
Shivakundan Singh Tej
,
R. Scott Poethig
,
Ian R. Henderson
,
Steven E. Jacobsen
,
Wenzhong Wang
,
Pamela J. Green
,
and
Blake C. Meyers
Genome Res.
October 2006
16
:
1276
-
1288
;
Published in Advance
September 5, 2006
,
doi:
10.1101/gr.5530106
Abstract
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COMMENTARY
:
Life with 25,000 Genes
R. Scott Poethig
Genome Res.
March 1, 2001
11
:
313
-
316
;
doi:
10.1101/gr
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INSIGHT/OUTLOOK
:
Drosophila melanogaster
: A Genome Sequenced
R. Scott Hawley
and
Michelle Y. Walker
Genome Res.
May 1, 2000
10
:
593
-
594
;
doi:
10.1101/gr.10.5.593
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Single-cell gene signature scoring
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