Searching journal content for Pieter J. de Jong in author.

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  1. Resource: A lacZ reporter gene expression atlas for 313 adult KOMP mutant mouse lines
    • David B. West,
    • Ravi K. Pasumarthi,
    • Brian Baridon,
    • Esi Djan,
    • Amanda Trainor,
    • Stephen M. Griffey,
    • Eric K. Engelhard,
    • Jared Rapp,
    • Bowen Li,
    • Pieter J. de Jong,
    • and K.C. Kent Lloyd
    Genome Res. April 2015 25: 598-607; Published in Advance January 15, 2015, doi:10.1101/gr.184184.114
  2. Resource: A comprehensive molecular cytogenetic analysis of chromosome rearrangements in gibbons
    • Oronzo Capozzi,
    • Lucia Carbone,
    • Roscoe R. Stanyon,
    • Annamaria Marra,
    • Fengtang Yang,
    • Christopher W. Whelan,
    • Pieter J. de Jong,
    • Mariano Rocchi,
    • and Nicoletta Archidiacono
    Genome Res. December 2012 22: 2520-2528; Published in Advance August 14, 2012, doi:10.1101/gr.138651.112
  3. Research: Clcn4-2 genomic structure differs between the X locus in Mus spretus and the autosomal locus in Mus musculus: AT motif enrichment on the X
    • Di Kim Nguyen,
    • Fan Yang,
    • Rajinder Kaul,
    • Can Alkan,
    • Anthony Antonellis,
    • Karen F. Friery,
    • Baoli Zhu,
    • Pieter J. de Jong,
    • and Christine M. Disteche
    Genome Res. March 2011 21: 402-409; Published in Advance January 31, 2011, doi:10.1101/gr.108563.110
  4. LETTER: Comparative sequence analysis of primate subtelomeres originating from a chromosome fission event
    • M. Katharine Rudd,
    • RaeLynn M. Endicott,
    • Cynthia Friedman,
    • Megan Walker,
    • Janet M. Young,
    • Kazutoyo Osoegawa,
    • NISC Comparative Sequencing Program,
    • Pieter J. de Jong,
    • Eric D. Green,
    • and Barbara J. Trask
    Genome Res. January 2009 19: 33-41; Published in Advance October 24, 2008, doi:10.1101/gr.083170.108
  5. LETTER: The amphioxus genome illuminates vertebrate origins and cephalochordate biology
    • Linda Z. Holland,
    • Ricard Albalat,
    • Kaoru Azumi,
    • Èlia Benito-Gutiérrez,
    • Matthew J. Blow,
    • Marianne Bronner-Fraser,
    • Frederic Brunet,
    • Thomas Butts,
    • Simona Candiani,
    • Larry J. Dishaw,
    • David E.K. Ferrier,
    • Jordi Garcia-Fernàndez,
    • Jeremy J. Gibson-Brown,
    • Carmela Gissi,
    • Adam Godzik,
    • Finn Hallböök,
    • Dan Hirose,
    • Kazuyoshi Hosomichi,
    • Tetsuro Ikuta,
    • Hidetoshi Inoko,
    • Masanori Kasahara,
    • Jun Kasamatsu,
    • Takeshi Kawashima,
    • Ayuko Kimura,
    • Masaaki Kobayashi,
    • Zbynek Kozmik,
    • Kaoru Kubokawa,
    • Vincent Laudet,
    • Gary W. Litman,
    • Alice C. McHardy,
    • Daniel Meulemans,
    • Masaru Nonaka,
    • Robert P. Olinski,
    • Zeev Pancer,
    • Len A. Pennacchio,
    • Mario Pestarino,
    • Jonathan P. Rast,
    • Isidore Rigoutsos,
    • Marc Robinson-Rechavi,
    • Graeme Roch,
    • Hidetoshi Saiga,
    • Yasunori Sasakura,
    • Masanobu Satake,
    • Yutaka Satou,
    • Michael Schubert,
    • Nancy Sherwood,
    • Takashi Shiina,
    • Naohito Takatori,
    • Javier Tello,
    • Pavel Vopalensky,
    • Shuichi Wada,
    • Anlong Xu,
    • Yuzhen Ye,
    • Keita Yoshida,
    • Fumiko Yoshizaki,
    • Jr-Kai Yu,
    • Qing Zhang,
    • Christian M. Zmasek,
    • Pieter J. de Jong,
    • Kazutoyo Osoegawa,
    • Nicholas H. Putnam,
    • Daniel S. Rokhsar,
    • Noriyuki Satoh,
    • and Peter W.H. Holland
    Genome Res. July 2008 18: 1100-1111; Published in Advance June 18, 2008, doi:10.1101/gr.073676.107
  6. RESOURCE: Islands of euchromatin-like sequence and expressed polymorphic sequences within the short arm of human chromosome 21
    • Robert Lyle,
    • Paola Prandini,
    • Kazutoyo Osoegawa,
    • Boudewijn ten Hallers,
    • Sean Humphray,
    • Baoli Zhu,
    • Eduardo Eyras,
    • Robert Castelo,
    • Christine P. Bird,
    • Sarantos Gagos,
    • Carol Scott,
    • Antony Cox,
    • Samuel Deutsch,
    • Catherine Ucla,
    • Marc Cruts,
    • Sophie Dahoun,
    • Xinwei She,
    • Frederique Bena,
    • Sheng-Yue Wang,
    • Christine Van Broeckhoven,
    • Evan E. Eichler,
    • Roderic Guigo,
    • Jane Rogers,
    • Pieter J. de Jong,
    • Alexandre Reymond,
    • and Stylianos E. Antonarakis
    Genome Res. November 2007 17: 1690-1696; Published in Advance September 25, 2007, doi:10.1101/gr.6675307
  7. Methods: Decoding the fine-scale structure of a breast cancer genome and transcriptome
    • Stanislav Volik,
    • Benjamin J. Raphael,
    • Guiqing Huang,
    • Michael R. Stratton,
    • Graham Bignel,
    • John Murnane,
    • John H. Brebner,
    • Krystyna Bajsarowicz,
    • Pamela L. Paris,
    • Quanzhou Tao,
    • David Kowbel,
    • Anna Lapuk,
    • Dmitri A. Shagin,
    • Irina A. Shagina,
    • Joe W. Gray,
    • Jan-Fang Cheng,
    • Pieter J. de Jong,
    • Pavel Pevzner,
    • and Colin Collins
    Genome Res. March 2006 16: 394-404; Published in Advance February 3, 2006, doi:10.1101/gr.4247306
  8. LETTER: Independent intrachromosomal recombination events underlie the pericentric inversions of chimpanzee and gorilla chromosomes homologous to human chromosome 16
    • Violaine Goidts,
    • Justyna M. Szamalek,
    • Pieter J. de Jong,
    • David N. Cooper,
    • Nadia Chuzhanova,
    • Horst Hameister,
    • and Hildegard Kehrer-Sawatzki
    Genome Res. September 2005 15: 1232-1242; doi:10.1101/gr.3732505
  9. Methods: Pooled genomic indexing of rhesus macaque
    • Aleksandar Milosavljevic,
    • Ronald A. Harris,
    • Erica J. Sodergren,
    • Andrew R. Jackson,
    • Ken J. Kalafus,
    • Anne Hodgson,
    • Andrew Cree,
    • Weilie Dai,
    • Miklos Csuros,
    • Baoli Zhu,
    • Pieter J. de Jong,
    • George M. Weinstock,
    • and Richard A. Gibbs
    Genome Res. February 2005 15: 292-301; doi:10.1101/gr.3162505
  10. LETTER: Recurrent Sites for New Centromere Seeding
    • Mario Ventura,
    • Stefania Weigl,
    • Lucia Carbone,
    • Maria Francesca Cardone,
    • Doriana Misceo,
    • Mariagrazia Teti,
    • Pietro D'Addabbo,
    • Annelise Wandall,
    • Erik Björck,
    • Pieter J. de Jong,
    • Xinwei She,
    • Evan E. Eichler,
    • Nicoletta Archidiacono,
    • and Mariano Rocchi
    Genome Res. September 2004 14: 1696-1703; doi:10.1101/gr.2608804
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