Searching journal content for Paul W. Sternberg in author.

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  1. Resource: Genome-wide discovery of active regulatory elements and transcription factor footprints in Caenorhabditis elegans using DNase-seq
    • Margaret C.W. Ho,
    • Porfirio Quintero-Cadena,
    • and Paul W. Sternberg
    Genome Res. December 2017 27: 2108-2119; Published in Advance October 26, 2017, doi:10.1101/gr.223735.117
  2. Resource: Comparative validation of the D. melanogaster modENCODE transcriptome annotation
    • Zhen-Xia Chen,
    • David Sturgill,
    • Jiaxin Qu,
    • Huaiyang Jiang,
    • Soo Park,
    • Nathan Boley,
    • Ana Maria Suzuki,
    • Anthony R. Fletcher,
    • David C. Plachetzki,
    • Peter C. FitzGerald,
    • Carlo G. Artieri,
    • Joel Atallah,
    • Olga Barmina,
    • James B. Brown,
    • Kerstin P. Blankenburg,
    • Emily Clough,
    • Abhijit Dasgupta,
    • Sai Gubbala,
    • Yi Han,
    • Joy C. Jayaseelan,
    • Divya Kalra,
    • Yoo-Ah Kim,
    • Christie L. Kovar,
    • Sandra L. Lee,
    • Mingmei Li,
    • James D. Malley,
    • John H. Malone,
    • Tittu Mathew,
    • Nicolas R. Mattiuzzo,
    • Mala Munidasa,
    • Donna M. Muzny,
    • Fiona Ongeri,
    • Lora Perales,
    • Teresa M. Przytycka,
    • Ling-Ling Pu,
    • Garrett Robinson,
    • Rebecca L. Thornton,
    • Nehad Saada,
    • Steven E. Scherer,
    • Harold E. Smith,
    • Charles Vinson,
    • Crystal B. Warner,
    • Kim C. Worley,
    • Yuan-Qing Wu,
    • Xiaoyan Zou,
    • Peter Cherbas,
    • Manolis Kellis,
    • Michael B. Eisen,
    • Fabio Piano,
    • Karin Kionte,
    • David H. Fitch,
    • Paul W. Sternberg,
    • Asher D. Cutter,
    • Michael O. Duff,
    • Roger A. Hoskins,
    • Brenton R. Graveley,
    • Richard A. Gibbs,
    • Peter J. Bickel,
    • Artyom Kopp,
    • Piero Carninci,
    • Susan E. Celniker,
    • Brian Oliver,
    • and Stephen Richards
    Genome Res. July 2014 24: 1209-1223; Published in Advance July 1, 2014, doi:10.1101/gr.159384.113
    OPEN ACCESS ARTICLE
  3. Research: Transcription factor redundancy and tissue-specific regulation: Evidence from functional and physical network connectivity
    • Steven G. Kuntz,
    • Brian A. Williams,
    • Paul W. Sternberg,
    • and Barbara J. Wold
    Genome Res. October 2012 22: 1907-1919; Published in Advance June 22, 2012, doi:10.1101/gr.133306.111
  4. Method: Scaffolding a Caenorhabditis nematode genome with RNA-seq
    • Ali Mortazavi,
    • Erich M. Schwarz,
    • Brian Williams,
    • Lorian Schaeffer,
    • Igor Antoshechkin,
    • Barbara J. Wold,
    • and Paul W. Sternberg
    Genome Res. December 2010 20: 1740-1747; Published in Advance October 27, 2010, doi:10.1101/gr.111021.110
  5. Methods: Multigenome DNA sequence conservation identifies Hox cis-regulatory elements
    • Steven G. Kuntz,
    • Erich M. Schwarz,
    • John A. DeModena,
    • Tristan De Buysscher,
    • Diane Trout,
    • Hiroaki Shizuya,
    • Paul W. Sternberg,
    • and Barbara J. Wold
    Genome Res. December 2008 18: 1955-1968; Published in Advance November 3, 2008, doi:10.1101/gr.085472.108
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