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Nathan Johnson
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:
Integrated annotations and analyses of small RNA–producing loci from 47 diverse plants
Alice Lunardon
,
Nathan R. Johnson
,
Emily Hagerott
,
Tamia Phifer
,
Seth Polydore
,
Ceyda Coruh
,
and
Michael J. Axtell
Genome Res.
March 2020
30
:
497
-
513
;
Published in Advance
March 16, 2020
,
doi:
10.1101/gr.256750.119
Abstract
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Method
:
Detection of long repeat expansions from PCR-free whole-genome sequence data
Egor Dolzhenko
,
Joke J.F.A. van Vugt
,
Richard J. Shaw
,
Mitchell A. Bekritsky
,
Marka van Blitterswijk
,
Giuseppe Narzisi
,
Subramanian S. Ajay
,
Vani Rajan
,
Bryan R. Lajoie
,
Nathan H. Johnson
,
Zoya Kingsbury
,
Sean J. Humphray
,
Raymond D. Schellevis
,
William J. Brands
,
Matt Baker
,
Rosa Rademakers
,
Maarten Kooyman
,
Gijs H.P. Tazelaar
,
Michael A. van Es
,
Russell McLaughlin
,
William Sproviero
,
Aleksey Shatunov
,
Ashley Jones
,
Ahmad Al Khleifat
,
Alan Pittman
,
Sarah Morgan
,
Orla Hardiman
,
Ammar Al-Chalabi
,
Chris Shaw
,
Bradley Smith
,
Edmund J. Neo
,
Karen Morrison
,
Pamela J. Shaw
,
Catherine Reeves
,
Lara Winterkorn
,
Nancy S. Wexler
,
The US–Venezuela Collaborative Research Group
,
David E. Housman
,
Christopher W. Ng
,
Alina L. Li
,
Ryan J. Taft
,
Leonard H. van den Berg
,
David R. Bentley
,
Jan H. Veldink
,
and
Michael A. Eberle
Genome Res.
November 2017
27
:
1895
-
1903
;
Published in Advance
September 8, 2017
,
doi:
10.1101/gr.225672.117
Abstract
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RESOURCE
:
An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
Vardhman K. Rakyan
,
Thomas A. Down
,
Natalie P. Thorne
,
Paul Flicek
,
Eugene Kulesha
,
Stefan Gräf
,
Eleni M. Tomazou
,
Liselotte Bäckdahl
,
Nathan Johnson
,
Marlis Herberth
,
Kevin L. Howe
,
David K. Jackson
,
Marcos M. Miretti
,
Heike Fiegler
,
John C. Marioni
,
Ewan Birney
,
Tim J.P. Hubbard
,
Nigel P. Carter
,
Simon Tavaré
,
and
Stephan Beck
Genome Res.
September 2008
18
:
1518
-
1529
;
Published in Advance
June 24, 2008
,
doi:
10.1101/gr.077479.108
Abstract
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Single-cell gene signature scoring
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