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Michele Clamp
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RESOURCE
:
Initial sequence and comparative analysis of the cat genome
Joan U. Pontius
,
James C. Mullikin
,
Douglas R. Smith
,
Agencourt Sequencing Team
,
Kerstin Lindblad-Toh
,
Sante Gnerre
,
Michele Clamp
,
Jean Chang
,
Robert Stephens
,
Beena Neelam
,
Natalia Volfovsky
,
Alejandro A. Schäffer
,
Richa Agarwala
,
Kristina Narfström
,
William J. Murphy
,
Urs Giger
,
Alfred L. Roca
,
Agostinho Antunes
,
Marilyn Menotti-Raymond
,
Naoya Yuhki
,
Jill Pecon-Slattery
,
Warren E. Johnson
,
Guillaume Bourque
,
Glenn Tesler
,
NISC Comparative Sequencing Program
,
and
Stephen J. O’Brien
Genome Res.
November 2007
17
:
1675
-
1689
;
doi:
10.1101/gr.6380007
Abstract
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ARTICLE
:
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
Elliott H. Margulies
,
Gregory M. Cooper
,
George Asimenos
,
Daryl J. Thomas
,
Colin N. Dewey
,
Adam Siepel
,
Ewan Birney
,
Damian Keefe
,
Ariel S. Schwartz
,
Minmei Hou
,
James Taylor
,
Sergey Nikolaev
,
Juan I. Montoya-Burgos
,
Ari Löytynoja
,
Simon Whelan
,
Fabio Pardi
,
Tim Massingham
,
James B. Brown
,
Peter Bickel
,
Ian Holmes
,
James C. Mullikin
,
Abel Ureta-Vidal
,
Benedict Paten
,
Eric A. Stone
,
Kate R. Rosenbloom
,
W. James Kent
,
Gerard G. Bouffard
,
Xiaobin Guan
,
Nancy F. Hansen
,
Jacquelyn R. Idol
,
Valerie V.B. Maduro
,
Baishali Maskeri
,
Jennifer C. McDowell
,
Morgan Park
,
Pamela J. Thomas
,
Alice C. Young
,
Robert W. Blakesley
,
Donna M. Muzny
,
Erica Sodergren
,
David A. Wheeler
,
Kim C. Worley
,
Huaiyang Jiang
,
George M. Weinstock
,
Richard A. Gibbs
,
Tina Graves
,
Robert Fulton
,
Elaine R. Mardis
,
Richard K. Wilson
,
Michele Clamp
,
James Cuff
,
Sante Gnerre
,
David B. Jaffe
,
Jean L. Chang
,
Kerstin Lindblad-Toh
,
Eric S. Lander
,
Angie Hinrichs
,
Heather Trumbower
,
Hiram Clawson
,
Ann Zweig
,
Robert M. Kuhn
,
Galt Barber
,
Rachel Harte
,
Donna Karolchik
,
Matthew A. Field
,
Richard A. Moore
,
Carrie A. Matthewson
,
Jacqueline E. Schein
,
Marco A. Marra
,
Stylianos E. Antonarakis
,
Serafim Batzoglou
,
Nick Goldman
,
Ross Hardison
,
David Haussler
,
Webb Miller
,
Lior Pachter
,
Eric D. Green
,
and
Arend Sidow
Genome Res.
June 2007
17
:
760
-
774
;
doi:
10.1101/gr.6034307
Abstract
Full Text
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OPEN ACCESS ARTICLE
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ENSEMBL Special
:
The Ensembl Core Software Libraries
Arne Stabenau
,
Graham McVicker
,
Craig Melsopp
,
Glenn Proctor
,
Michele Clamp
,
and
Ewan Birney
Genome Res.
May 2004
14
:
929
-
933
;
doi:
10.1101/gr.1857204
Abstract
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ENSEMBL Special
:
The Ensembl Analysis Pipeline
Simon C. Potter
,
Laura Clarke
,
Val Curwen
,
Stephen Keenan
,
Emmanuel Mongin
,
Stephen M.J. Searle
,
Arne Stabenau
,
Roy Storey
,
and
Michele Clamp
Genome Res.
May 2004
14
:
934
-
941
;
doi:
10.1101/gr.1859804
Abstract
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ENSEMBL Special
:
The Ensembl Automatic Gene Annotation System
Val Curwen
,
Eduardo Eyras
,
T. Daniel Andrews
,
Laura Clarke
,
Emmanuel Mongin
,
Steven M.J. Searle
,
and
Michele Clamp
Genome Res.
May 2004
14
:
942
-
950
;
doi:
10.1101/gr.1858004
Abstract
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ENSEMBL Special
:
The Otter Annotation System
Stephen M.J. Searle
,
James Gilbert
,
Vivek Iyer
,
and
Michele Clamp
Genome Res.
May 2004
14
:
963
-
970
;
doi:
10.1101/gr.1864804
Abstract
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ENSEMBL Special
:
ESTGenes: Alternative Splicing From ESTs in Ensembl
Eduardo Eyras
,
Mario Caccamo
,
Val Curwen
,
and
Michele Clamp
Genome Res.
May 2004
14
:
976
-
987
;
doi:
10.1101/gr.1862204
Abstract
Full Text
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Supplemental Research Data
URL INFO
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ENSEMBL Special
:
GeneWise and Genomewise
Ewan Birney
,
Michele Clamp
,
and
Richard Durbin
Genome Res.
May 2004
14
:
988
-
995
;
doi:
10.1101/gr.1865504
Abstract
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ENSEMBL Special
:
An Overview of Ensembl
Ewan Birney
,
T. Daniel Andrews
,
Paul Bevan
,
Mario Caccamo
,
Yuan Chen
,
Laura Clarke
,
Guy Coates
,
James Cuff
,
Val Curwen
,
Tim Cutts
,
Thomas Down
,
Eduardo Eyras
,
Xose M. Fernandez-Suarez
,
Paul Gane
,
Brian Gibbins
,
James Gilbert
,
Martin Hammond
,
Hans-Rudolf Hotz
,
Vivek Iyer
,
Kerstin Jekosch
,
Andreas Kahari
,
Arek Kasprzyk
,
Damian Keefe
,
Stephen Keenan
,
Heikki Lehvaslaiho
,
Graham McVicker
,
Craig Melsopp
,
Patrick Meidl
,
Emmanuel Mongin
,
Roger Pettett
,
Simon Potter
,
Glenn Proctor
,
Mark Rae
,
Steve Searle
,
Guy Slater
,
Damian Smedley
,
James Smith
,
Will Spooner
,
Arne Stabenau
,
James Stalker
,
Roy Storey
,
Abel Ureta-Vidal
,
K. Cara Woodwark
,
Graham Cameron
,
Richard Durbin
,
Anthony Cox
,
Tim Hubbard
,
and
Michele Clamp
Genome Res.
May 2004
14
:
925
-
928
;
Published in Advance
April 12, 2004
,
doi:
10.1101/gr.1860604
Abstract
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Methods
:
Biopipe: A Flexible Framework for Protocol-Based Bioinformatics Analysis
Shawn Hoon
,
Kiran Kumar Ratnapu
,
Jer-ming Chia
,
Balamurugan Kumarasamy
,
Xiao Juguang
,
Michele Clamp
,
Arne Stabenau
,
Simon Potter
,
Laura Clarke
,
and
Elia Stupka
Genome Res.
August 2003
13
:
1904
-
1915
;
Published in Advance
July 17, 2003
,
doi:
10.1101/gr.1363103
Abstract
Full Text
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