Searching journal content for Michael Snyder in author.

Displaying results 1-10 of 43
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  1. Method: Modeling gene interactions in polygenic prediction via geometric deep learning
    • Han Li,
    • Jianyang Zeng,
    • Michael P. Snyder,
    • and Sai Zhang
    Genome Res. January 2025 35: 178-187; Published in Advance November 19, 2024, doi:10.1101/gr.279694.124
    OPEN ACCESS ARTICLE
  2. Method: Simultaneous profiling of host expression and microbial abundance by spatial metatranscriptome sequencing
    • Lin Lyu,
    • Xue Li,
    • Ru Feng,
    • Xin Zhou,
    • Tuhin K. Guha,
    • Xiaofei Yu,
    • Guo Qiang Chen,
    • Yufeng Yao,
    • Bing Su,
    • Duowu Zou,
    • Michael P. Snyder,
    • and Lei Chen
    Genome Res. March 2023 33: 401-411; Published in Advance March 27, 2023, doi:10.1101/gr.277178.122
  3. Resource: Precision environmental health monitoring by longitudinal exposome and multi-omics profiling
    • Peng Gao,
    • Xiaotao Shen,
    • Xinyue Zhang,
    • Chao Jiang,
    • Sai Zhang,
    • Xin Zhou,
    • Sophia Miryam Schüssler-Fiorenza Rose,
    • and Michael Snyder
    Genome Res. June 2022 32: 1199-1214; Published in Advance June 6, 2022, doi:10.1101/gr.276521.121
    OPEN ACCESS ARTICLE
  4. Research: Mutability of mononucleotide repeats, not oxidative stress, explains the discrepancy between laboratory-accumulated mutations and the natural allele-frequency spectrum in C. elegans
    • Moein Rajaei,
    • Ayush Shekhar Saxena,
    • Lindsay M. Johnson,
    • Michael C. Snyder,
    • Timothy A. Crombie,
    • Robyn E. Tanny,
    • Erik C. Andersen,
    • Joanna Joyner-Matos,
    • and Charles F. Baer
    Genome Res. September 2021 31: 1602-1613; Published in Advance August 17, 2021, doi:10.1101/gr.275372.121
  5. Research: Longitudinal linked-read sequencing reveals ecological and evolutionary responses of a human gut microbiome during antibiotic treatment
    • Morteza Roodgar,
    • Benjamin H. Good,
    • Nandita R. Garud,
    • Stephen Martis,
    • Mohan Avula,
    • Wenyu Zhou,
    • Samuel M. Lancaster,
    • Hayan Lee,
    • Afshin Babveyh,
    • Sophia Nesamoney,
    • Katherine S. Pollard,
    • and Michael P. Snyder
    Genome Res. August 2021 31: 1433-1446; Published in Advance July 22, 2021, doi:10.1101/gr.265058.120
    OPEN ACCESS ARTICLE
  6. Resource: A limited set of transcriptional programs define major cell types
    • Alessandra Breschi,
    • Manuel Muñoz-Aguirre,
    • Valentin Wucher,
    • Carrie A. Davis,
    • Diego Garrido-Martín,
    • Sarah Djebali,
    • Jesse Gillis,
    • Dmitri D. Pervouchine,
    • Anna Vlasova,
    • Alexander Dobin,
    • Chris Zaleski,
    • Jorg Drenkow,
    • Cassidy Danyko,
    • Alexandra Scavelli,
    • Ferran Reverter,
    • Michael P. Snyder,
    • Thomas R. Gingeras,
    • and Roderic Guigó
    Genome Res. July 2020 30: 1047-1059; Published in Advance July 29, 2020, doi:10.1101/gr.263186.120
    OPEN ACCESS ARTICLE
  7. Method: Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome
    • Hagen Tilgner,
    • Fereshteh Jahanbani,
    • Ishaan Gupta,
    • Paul Collier,
    • Eric Wei,
    • Morten Rasmussen,
    • and Michael Snyder
    Genome Res. February 2018 28: 231-242; Published in Advance December 1, 2017, doi:10.1101/gr.230516.117
    OPEN ACCESS ARTICLE
  8. Method: Co-expression networks reveal the tissue-specific regulation of transcription and splicing
    • Ashis Saha,
    • Yungil Kim,
    • Ariel D.H. Gewirtz,
    • Brian Jo,
    • Chuan Gao,
    • Ian C. McDowell,
    • The GTEx Consortium,
    • Barbara E. Engelhardt,
    • and Alexis Battle
    Genome Res. November 2017 27: 1843-1858; Published in Advance October 11, 2017, doi:10.1101/gr.216721.116
    OPEN ACCESS ARTICLE
  9. Method: Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
    • Fan Yang,
    • Jiebiao Wang,
    • The GTEx Consortium,
    • Brandon L. Pierce,
    • and Lin S. Chen
    Genome Res. November 2017 27: 1859-1871; Published in Advance October 11, 2017, doi:10.1101/gr.216754.116
  10. Research: Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans
    • Can Cenik,
    • Elif Sarinay Cenik,
    • Gun W. Byeon,
    • Fabian Grubert,
    • Sophie I. Candille,
    • Damek Spacek,
    • Bilal Alsallakh,
    • Hagen Tilgner,
    • Carlos L. Araya,
    • Hua Tang,
    • Emiliano Ricci,
    • and Michael P. Snyder
    Genome Res. November 2015 25: 1610-1621; Published in Advance August 21, 2015, doi:10.1101/gr.193342.115
    OPEN ACCESS ARTICLE
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