Searching journal content for Michael Q. Zhang in author.

Displaying results 1-10 of 15
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  1. Research: The loss of heterochromatin is associated with multiscale three-dimensional genome reorganization and aberrant transcription during cellular senescence
    • Xianglin Zhang,
    • Xuehui Liu,
    • Zhenhai Du,
    • Lei Wei,
    • Huan Fang,
    • Qiongye Dong,
    • Jing Niu,
    • Yanda Li,
    • Juntao Gao,
    • Michael Q. Zhang,
    • Wei Xie,
    • and Xiaowo Wang
    Genome Res. July 2021 31: 1121-1135; Published in Advance June 17, 2021, doi:10.1101/gr.275235.121
  2. Research: Global transcriptional activity dynamics reveal functional enhancer RNAs
    • Yoon Jung Kim,
    • Peng Xie,
    • Lian Cao,
    • Michael Q. Zhang,
    • and Tae Hoon Kim
    Genome Res. December 2018 28: 1799-1811; Published in Advance October 23, 2018, doi:10.1101/gr.233486.117
    OPEN ACCESS ARTICLE
  3. Method: FIND: difFerential chromatin INteractions Detection using a spatial Poisson process
    • Mohamed Nadhir Djekidel,
    • Yang Chen,
    • and Michael Q. Zhang
    Genome Res. March 2018 28: 412-422; Published in Advance February 12, 2018, doi:10.1101/gr.212241.116
    OPEN ACCESS ARTICLE
  4. Research: Genome-wide map of regulatory interactions in the human genome
    • Nastaran Heidari,
    • Douglas H. Phanstiel,
    • Chao He,
    • Fabian Grubert,
    • Fereshteh Jahanbani,
    • Maya Kasowski,
    • Michael Q. Zhang,
    • and Michael P. Snyder
    Genome Res. December 2014 24: 1905-1917; Published in Advance September 16, 2014, doi:10.1101/gr.176586.114
    OPEN ACCESS ARTICLE
  5. Methods: High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing
    • Emily Hodges,
    • Andrew D. Smith,
    • Jude Kendall,
    • Zhenyu Xuan,
    • Kandasamy Ravi,
    • Michelle Rooks,
    • Michael Q. Zhang,
    • Kenny Ye,
    • Arindam Bhattacharjee,
    • Leonardo Brizuela,
    • W. Richard McCombie,
    • Michael Wigler,
    • Gregory J. Hannon,
    • and James B. Hicks
    Genome Res. September 2009 19: 1593-1605; Published in Advance July 6, 2009, doi:10.1101/gr.095190.109
    OPEN ACCESS ARTICLE
  6. Methods: High-resolution human core-promoter prediction with CoreBoost_HM
    • Xiaowo Wang,
    • Zhenyu Xuan,
    • Xiaoyue Zhao,
    • Yanda Li,
    • and Michael Q. Zhang
    Genome Res. February 2009 19: 266-275; Published in Advance November 7, 2008, doi:10.1101/gr.081638.108
  7. Methods: Scanning the human genome at kilobase resolution
    • Jun Chen,
    • Yeong C. Kim,
    • Yong-Chul Jung,
    • Zhenyu Xuan,
    • Geoff Dworkin,
    • Yanming Zhang,
    • Michael Q. Zhang,
    • and San Ming Wang
    Genome Res. May 2008 18: 751-762; Published in Advance February 21, 2008, doi:10.1101/gr.068304.107
  8. LETTER: Genome-wide mapping and analysis of active promoters in mouse embryonic stem cells and adult organs
    • Leah O. Barrera,
    • Zirong Li,
    • Andrew D. Smith,
    • Karen C. Arden,
    • Webster K. Cavenee,
    • Michael Q. Zhang,
    • Roland D. Green,
    • and Bing Ren
    Genome Res. January 2008 18: 46-59; Published in Advance November 27, 2007, doi:10.1101/gr.6654808
  9. LETTER: Large-scale structure of genomic methylation patterns
    • Robert A. Rollins,
    • Fatemeh Haghighi,
    • John R. Edwards,
    • Rajdeep Das,
    • Michael Q. Zhang,
    • Jingyue Ju,
    • and Timothy H. Bestor
    Genome Res. February 2006 16: 157-163; Published in Advance December 19, 2005, doi:10.1101/gr.4362006
  10. LETTER: The mouse genome: Experimental examination of gene predictions and transcriptional start sites
    • Sujit Dike,
    • Vivekanand S. Balija,
    • Lidia U. Nascimento,
    • Zhenyu Xuan,
    • Jacqueline Ou,
    • Theresa Zutavern,
    • Lance E. Palmer,
    • Greg Hannon,
    • Michael Q. Zhang,
    • and W. Richard McCombie
    Genome Res. December 2004 14: 2424-2429; doi:10.1101/gr.3158304
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