Searching journal content for Mathieu Lupien in author.

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  1. Research: Alu insertion variants alter gene transcript levels
    • Lindsay M. Payer,
    • Jared P. Steranka,
    • Maria S. Kryatova,
    • Giacomo Grillo,
    • Mathieu Lupien,
    • Pedro P. Rocha,
    • and Kathleen H. Burns
    Genome Res. December 2021 31: 2236-2248; Published in Advance November 19, 2021, doi:10.1101/gr.261305.120
  2. Method: Identifying clusters of cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks
    • Seyed Ali Madani Tonekaboni,
    • Parisa Mazrooei,
    • Victor Kofia,
    • Benjamin Haibe-Kains,
    • and Mathieu Lupien
    Genome Res. October 2019 29: 1733-1743; Published in Advance September 18, 2019, doi:10.1101/gr.248658.119
    OPEN ACCESS ARTICLE
  3. Research: High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma
    • Michael J. Johnston,
    • Ana Nikolic,
    • Nicoletta Ninkovic,
    • Paul Guilhamon,
    • Florence M.G. Cavalli,
    • Steven Seaman,
    • Franz J. Zemp,
    • John Lee,
    • Aly Abdelkareem,
    • Katrina Ellestad,
    • Alex Murison,
    • Michelle M. Kushida,
    • Fiona J. Coutinho,
    • Yussanne Ma,
    • Andrew J. Mungall,
    • Richard Moore,
    • Marco A. Marra,
    • Michael D. Taylor,
    • Peter B. Dirks,
    • Trevor J. Pugh,
    • Sorana Morrissy,
    • Bradley St Croix,
    • Douglas J. Mahoney,
    • Mathieu Lupien,
    • and Marco Gallo
    Genome Res. August 2019 29: 1211-1222; Published in Advance June 27, 2019, doi:10.1101/gr.246520.118
    OPEN ACCESS ARTICLE
  4. Research: The logic of transcriptional regulator recruitment architecture at cis-regulatory modules controlling liver functions
    • Julie Dubois-Chevalier,
    • Vanessa Dubois,
    • Hélène Dehondt,
    • Parisa Mazrooei,
    • Claire Mazuy,
    • Aurélien A. Sérandour,
    • Céline Gheeraert,
    • Penderia Guillaume,
    • Eric Baugé,
    • Bruno Derudas,
    • Nathalie Hennuyer,
    • Réjane Paumelle,
    • Guillemette Marot,
    • Jason S. Carroll,
    • Mathieu Lupien,
    • Bart Staels,
    • Philippe Lefebvre,
    • and Jérôme Eeckhoute
    Genome Res. June 2017 27: 985-996; Published in Advance April 11, 2017, doi:10.1101/gr.217075.116
  5. Research: Combinatorial effects of multiple enhancer variants in linkage disequilibrium dictate levels of gene expression to confer susceptibility to common traits
    • Olivia Corradin,
    • Alina Saiakhova,
    • Batool Akhtar-Zaidi,
    • Lois Myeroff,
    • Joseph Willis,
    • Richard Cowper-Sal·lari,
    • Mathieu Lupien,
    • Sanford Markowitz,
    • and Peter C. Scacheri
    Genome Res. January 2014 24: 1-13; Published in Advance November 6, 2013, doi:10.1101/gr.164079.113
  6. Research: Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus
    • Xiaoyang Zhang,
    • Richard Cowper-Sal·lari,
    • Swneke D. Bailey,
    • Jason H. Moore,
    • and Mathieu Lupien
    Genome Res. August 2012 22: 1437-1446; Published in Advance June 4, 2012, doi:10.1101/gr.135665.111
  7. Research: Epigenetic switch involved in activation of pioneer factor FOXA1-dependent enhancers
    • Aurélien A. Sérandour,
    • Stéphane Avner,
    • Frédéric Percevault,
    • Florence Demay,
    • Maud Bizot,
    • Céline Lucchetti-Miganeh,
    • Frédérique Barloy-Hubler,
    • Myles Brown,
    • Mathieu Lupien,
    • Raphaël Métivier,
    • Gilles Salbert,
    • and Jérôme Eeckhoute
    Genome Res. April 2011 21: 555-565; Published in Advance January 13, 2011, doi:10.1101/gr.111534.110
  8. Letter: Elucidation of the ELK1 target gene network reveals a role in the coordinate regulation of core components of the gene regulation machinery
    • Joanna Boros,
    • Ian J. Donaldson,
    • Amanda O'Donnell,
    • Zaneta A. Odrowaz,
    • Leo Zeef,
    • Mathieu Lupien,
    • Clifford A. Meyer,
    • X. Shirley Liu,
    • Myles Brown,
    • and Andrew D. Sharrocks
    Genome Res. November 2009 19: 1963-1973; Published in Advance August 17, 2009, doi:10.1101/gr.093047.109
    OPEN ACCESS ARTICLE
  9. Letter: Cell-type selective chromatin remodeling defines the active subset of FOXA1-bound enhancers
    • Jérôme Eeckhoute,
    • Mathieu Lupien,
    • Clifford A. Meyer,
    • Michael P. Verzi,
    • Ramesh A. Shivdasani,
    • X. Shirley Liu,
    • and Myles Brown
    Genome Res. March 2009 19: 372-380; Published in Advance January 7, 2009, doi:10.1101/gr.084582.108
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