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Marjan Farahbod
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:
Integrative chromatin state annotation of 234 human ENCODE4 cell types using Segway
Marjan Farahbod
,
Aboud Diab
,
Paul Sud
,
Meenakshi S. Kagda
,
Ian Whaling
,
Mehdi Foroozandeh
,
Ishan Goel
,
Habib Daneshpajouh
,
Benjamin Hitz
,
J. Michael Cherry
,
and
Maxwell W. Libbrecht
Genome Res.
October 6, 2025
gr.280633.125
;
Published in Advance
October 6, 2025
,
doi:
10.1101/gr.280633.125
Abstract
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Method
:
Robust chromatin state annotation
Mehdi Foroozandeh Shahraki
,
Marjan Farahbod
,
and
Maxwell W. Libbrecht
Genome Res.
March 2024
34
:
469
-
483
;
Published in Advance
March 21, 2024
,
doi:
10.1101/gr.278343.123
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Research
:
Untangling the effects of cellular composition on coexpression analysis
Marjan Farahbod
and
Paul Pavlidis
Genome Res.
June 2020
30
:
849
-
859
;
Published in Advance
June 24, 2020
,
doi:
10.1101/gr.256735.119
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Single-cell gene signature scoring
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Short tandem repeat genotyping using long reads
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