Searching journal content for Mandy J. Sanders in author.

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  1. Resource: Long-read assembly and comparative evidence-based reanalysis of Cryptosporidium genome sequences reveal expanded transporter repertoire and duplication of entire chromosome ends including subtelomeric regions
    • Rodrigo P. Baptista,
    • Yiran Li,
    • Adam Sateriale,
    • Mandy J. Sanders,
    • Karen L. Brooks,
    • Alan Tracey,
    • Brendan R.E. Ansell,
    • Aaron R. Jex,
    • Garrett W. Cooper,
    • Ethan D. Smith,
    • Rui Xiao,
    • Jennifer E. Dumaine,
    • Peter Georgeson,
    • Bernard J. Pope,
    • Matthew Berriman,
    • Boris Striepen,
    • James A. Cotton,
    • and Jessica C. Kissinger
    Genome Res. January 2022 32: 203-213; Published in Advance November 11, 2021, doi:10.1101/gr.275325.121
    OPEN ACCESS ARTICLE
  2. Method: Variant antigen repertoires in Trypanosoma congolense populations and experimental infections can be profiled from deep sequence data using universal protein motifs
    • Sara Silva Pereira,
    • Aitor Casas-Sánchez,
    • Lee R. Haines,
    • Moses Ogugo,
    • Kihara Absolomon,
    • Mandy Sanders,
    • Steve Kemp,
    • Álvaro Acosta-Serrano,
    • Harry Noyes,
    • Matthew Berriman,
    • and Andrew P. Jackson
    Genome Res. September 2018 28: 1383-1394; Published in Advance July 13, 2018, doi:10.1101/gr.234146.118
    OPEN ACCESS ARTICLE
  3. Research: Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals
    • Ulrike Böhme,
    • Thomas D. Otto,
    • James A. Cotton,
    • Sascha Steinbiss,
    • Mandy Sanders,
    • Samuel O. Oyola,
    • Antoine Nicot,
    • Sylvain Gandon,
    • Kailash P. Patra,
    • Colin Herd,
    • Ellen Bushell,
    • Katarzyna K. Modrzynska,
    • Oliver Billker,
    • Joseph M. Vinetz,
    • Ana Rivero,
    • Chris I. Newbold,
    • and Matthew Berriman
    Genome Res. April 2018 28: 547-560; Published in Advance March 2, 2018, doi:10.1101/gr.218123.116
    OPEN ACCESS ARTICLE
  4. Research: Genomic analysis of the causative agents of coccidiosis in domestic chickens
    • Adam J. Reid,
    • Damer P. Blake,
    • Hifzur R. Ansari,
    • Karen Billington,
    • Hilary P. Browne,
    • Josephine Bryant,
    • Matt Dunn,
    • Stacy S. Hung,
    • Fumiya Kawahara,
    • Diego Miranda-Saavedra,
    • Tareq B. Malas,
    • Tobias Mourier,
    • Hardeep Naghra,
    • Mridul Nair,
    • Thomas D. Otto,
    • Neil D. Rawlings,
    • Pierre Rivailler,
    • Alejandro Sanchez-Flores,
    • Mandy Sanders,
    • Chandra Subramaniam,
    • Yea-Ling Tay,
    • Yong Woo,
    • Xikun Wu,
    • Bart Barrell,
    • Paul H. Dear,
    • Christian Doerig,
    • Arthur Gruber,
    • Alasdair C. Ivens,
    • John Parkinson,
    • Marie-Adèle Rajandream,
    • Martin W. Shirley,
    • Kiew-Lian Wan,
    • Matthew Berriman,
    • Fiona M. Tomley,
    • and Arnab Pain
    Genome Res. October 2014 24: 1676-1685; Published in Advance July 11, 2014, doi:10.1101/gr.168955.113
    OPEN ACCESS ARTICLE
  5. Research: Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania
    • Matthew B. Rogers,
    • James D. Hilley,
    • Nicholas J. Dickens,
    • Jon Wilkes,
    • Paul A. Bates,
    • Daniel P. Depledge,
    • David Harris,
    • Yerim Her,
    • Pawel Herzyk,
    • Hideo Imamura,
    • Thomas D. Otto,
    • Mandy Sanders,
    • Kathy Seeger,
    • Jean-Claude Dujardin,
    • Matthew Berriman,
    • Deborah F. Smith,
    • Christiane Hertz-Fowler,
    • and Jeremy C. Mottram
    Genome Res. December 2011 21: 2129-2142; Published in Advance October 28, 2011, doi:10.1101/gr.122945.111
    OPEN ACCESS ARTICLE
  6. Research: Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance
    • Tim Downing,
    • Hideo Imamura,
    • Saskia Decuypere,
    • Taane G. Clark,
    • Graham H. Coombs,
    • James A. Cotton,
    • James D. Hilley,
    • Simonne de Doncker,
    • Ilse Maes,
    • Jeremy C. Mottram,
    • Mike A. Quail,
    • Suman Rijal,
    • Mandy Sanders,
    • Gabriele Schönian,
    • Olivia Stark,
    • Shyam Sundar,
    • Manu Vanaerschot,
    • Christiane Hertz-Fowler,
    • Jean-Claude Dujardin,
    • and Matthew Berriman
    Genome Res. December 2011 21: 2143-2156; Published in Advance October 28, 2011, doi:10.1101/gr.123430.111
    OPEN ACCESS ARTICLE
  7. LETTER: Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways
    • Nicholas R. Thomson,
    • Debra J. Clayton,
    • Daniel Windhorst,
    • Georgios Vernikos,
    • Susanne Davidson,
    • Carol Churcher,
    • Michael A. Quail,
    • Mark Stevens,
    • Michael A. Jones,
    • Michael Watson,
    • Andy Barron,
    • Abigail Layton,
    • Derek Pickard,
    • Robert A. Kingsley,
    • Alex Bignell,
    • Louise Clark,
    • Barbara Harris,
    • Doug Ormond,
    • Zahra Abdellah,
    • Karen Brooks,
    • Inna Cherevach,
    • Tracey Chillingworth,
    • John Woodward,
    • Halina Norberczak,
    • Angela Lord,
    • Claire Arrowsmith,
    • Kay Jagels,
    • Sharon Moule,
    • Karen Mungall,
    • Mandy Sanders,
    • Sally Whitehead,
    • Jose A. Chabalgoity,
    • Duncan Maskell,
    • Tom Humphrey,
    • Mark Roberts,
    • Paul A. Barrow,
    • Gordon Dougan,
    • and Julian Parkhill
    Genome Res. October 2008 18: 1624-1637; Published in Advance June 26, 2008, doi:10.1101/gr.077404.108
  8. LETTER: Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes
    • Mohammed Sebaihia,
    • Michael W. Peck,
    • Nigel P. Minton,
    • Nicholas R. Thomson,
    • Matthew T.G. Holden,
    • Wilfrid J. Mitchell,
    • Andrew T. Carter,
    • Stephen D. Bentley,
    • David R. Mason,
    • Lisa Crossman,
    • Catherine J. Paul,
    • Alasdair Ivens,
    • Marjon H.J. Wells-Bennik,
    • Ian J. Davis,
    • Ana M. Cerdeño-Tárraga,
    • Carol Churcher,
    • Michael A. Quail,
    • Tracey Chillingworth,
    • Theresa Feltwell,
    • Audrey Fraser,
    • Ian Goodhead,
    • Zahra Hance,
    • Kay Jagels,
    • Natasha Larke,
    • Mark Maddison,
    • Sharon Moule,
    • Karen Mungall,
    • Halina Norbertczak,
    • Ester Rabbinowitsch,
    • Mandy Sanders,
    • Mark Simmonds,
    • Brian White,
    • Sally Whithead,
    • and Julian Parkhill
    Genome Res. July 2007 17: 1082-1092; Published in Advance May 22, 2007, doi:10.1101/gr.6282807
    OPEN ACCESS ARTICLE
  9. ARTICLE: The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation
    • Nicholas R. Thomson,
    • Corin Yeats,
    • Kenneth Bell,
    • Matthew T.G. Holden,
    • Stephen D. Bentley,
    • Morag Livingstone,
    • Ana M. Cerdeño-Tárraga,
    • Barbara Harris,
    • Jon Doggett,
    • Doug Ormond,
    • Karen Mungall,
    • Kay Clarke,
    • Theresa Feltwell,
    • Zahra Hance,
    • Mandy Sanders,
    • Michael A. Quail,
    • Claire Price,
    • Bart G. Barrell,
    • Julian Parkhill,
    • and David Longbottom
    Genome Res. May 2005 15: 629-640; Published in Advance April 18, 2005, doi:10.1101/gr.3684805
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