Searching journal content for M. Lance Cooper in author.

Displaying results 1-10 of 21
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  1. Research: Long-read genome sequencing and variant reanalysis increase diagnostic yield in neurodevelopmental disorders
    • Susan M. Hiatt,
    • James M.J. Lawlor,
    • Lori H. Handley,
    • Donald R. Latner,
    • Zachary T. Bonnstetter,
    • Candice R. Finnila,
    • Michelle L. Thompson,
    • Lori Beth Boston,
    • Melissa Williams,
    • Ivan Rodriguez Nunez,
    • Jerry Jenkins,
    • Whitley V. Kelley,
    • E. Martina Bebin,
    • Michael A. Lopez,
    • Anna C.E. Hurst,
    • Bruce R. Korf,
    • Jeremy Schmutz,
    • Jane Grimwood,
    • and Gregory M. Cooper
    Genome Res. November 2024 34: 1747-1762; Published in Advance September 19, 2024, doi:10.1101/gr.279227.124
  2. Resource: Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs
    • Ashlyn G. Anderson,
    • Belle A. Moyers,
    • Jacob M. Loupe,
    • Ivan Rodriguez-Nunez,
    • Stephanie A. Felker,
    • James M.J. Lawlor,
    • William E. Bunney,
    • Blynn G. Bunney,
    • Preston M. Cartagena,
    • Adolfo Sequeira,
    • Stanley J. Watson,
    • Huda Akil,
    • Eric M. Mendenhall,
    • Gregory M. Cooper,
    • and Richard M. Myers
    Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123
  3. Method: Probabilistic association of differentially expressed genes with cis-regulatory elements
    • Brian S. Roberts,
    • Ashlyn G. Anderson,
    • E. Christopher Partridge,
    • Gregory M. Cooper,
    • and Richard M. Myers
    Genome Res. April 2024 34: 620-632; Published in Advance April 17, 2024, doi:10.1101/gr.278598.123
  4. Research: Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands
    • Brian S. Roberts,
    • E. Christopher Partridge,
    • Bryan A. Moyers,
    • Vikram Agarwal,
    • Kimberly M. Newberry,
    • Beth K. Martin,
    • Jay Shendure,
    • Richard M. Myers,
    • and Gregory M. Cooper
    Genome Res. May 2021 31: 866-876; Published in Advance April 20, 2021, doi:10.1101/gr.270751.120
  5. Corrigendum: Corrigendum: A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
    • Fumitaka Inoue,
    • Martin Kircher,
    • Beth Martin,
    • Gregory M. Cooper,
    • Daniela M. Witten,
    • Michael T. McManus,
    • Nadav Ahituv,
    • and Jay Shendure
    Genome Res. May 2018 28: 766.3; doi:10.1101/gr.237321.118
    OPEN ACCESS ARTICLE
  6. Resource: A genome-wide interactome of DNA-associated proteins in the human liver
    • Ryne C. Ramaker,
    • Daniel Savic,
    • Andrew A. Hardigan,
    • Kimberly Newberry,
    • Gregory M. Cooper,
    • Richard M. Myers,
    • and Sara J. Cooper
    Genome Res. November 2017 27: 1950-1960; Published in Advance October 11, 2017, doi:10.1101/gr.222083.117
  7. Research: A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
    • Fumitaka Inoue,
    • Martin Kircher,
    • Beth Martin,
    • Gregory M. Cooper,
    • Daniela M. Witten,
    • Michael T. McManus,
    • Nadav Ahituv,
    • and Jay Shendure
    Genome Res. January 2017 27: 38-52; Published in Advance November 9, 2016, doi:10.1101/gr.212092.116
  8. Research: Promoter-distal RNA polymerase II binding discriminates active from inactive CCAAT/ enhancer-binding protein beta binding sites
    • Daniel Savic,
    • Brian S. Roberts,
    • Julia B. Carleton,
    • E. Christopher Partridge,
    • Michael A. White,
    • Barak A. Cohen,
    • Gregory M. Cooper,
    • Jason Gertz,
    • and Richard M. Myers
    Genome Res. December 2015 25: 1791-1800; Published in Advance October 20, 2015, doi:10.1101/gr.191593.115
  9. Perspective: Parlez-vous VUS?
    • Gregory M. Cooper
    Genome Res. October 2015 25: 1423-1426; doi:10.1101/gr.190116.115
    OPEN ACCESS ARTICLE
  10. Research: Actionable exomic incidental findings in 6503 participants: challenges of variant classification
    • Laura M. Amendola,
    • Michael O. Dorschner,
    • Peggy D. Robertson,
    • Joseph S. Salama,
    • Ragan Hart,
    • Brian H. Shirts,
    • Mitzi L. Murray,
    • Mari J. Tokita,
    • Carlos J. Gallego,
    • Daniel Seung Kim,
    • James T. Bennett,
    • David R. Crosslin,
    • Jane Ranchalis,
    • Kelly L. Jones,
    • Elisabeth A. Rosenthal,
    • Ella R. Jarvik,
    • Andy Itsara,
    • Emily H. Turner,
    • Daniel S. Herman,
    • Jennifer Schleit,
    • Amber Burt,
    • Seema M. Jamal,
    • Jenica L. Abrudan,
    • Andrew D. Johnson,
    • Laura K. Conlin,
    • Matthew C. Dulik,
    • Avni Santani,
    • Danielle R. Metterville,
    • Melissa Kelly,
    • Ann Katherine M. Foreman,
    • Kristy Lee,
    • Kent D. Taylor,
    • Xiuqing Guo,
    • Kristy Crooks,
    • Lesli A. Kiedrowski,
    • Leslie J. Raffel,
    • Ora Gordon,
    • Kalotina Machini,
    • Robert J. Desnick,
    • Leslie G. Biesecker,
    • Steven A. Lubitz,
    • Surabhi Mulchandani,
    • Greg M. Cooper,
    • Steven Joffe,
    • C. Sue Richards,
    • Yaoping Yang,
    • Jerome I. Rotter,
    • Stephen S. Rich,
    • Christopher J. O’Donnell,
    • Jonathan S. Berg,
    • Nancy B. Spinner,
    • James P. Evans,
    • Stephanie M. Fullerton,
    • Kathleen A. Leppig,
    • Robin L. Bennett,
    • Thomas Bird,
    • Virginia P. Sybert,
    • William M. Grady,
    • Holly K. Tabor,
    • Jerry H. Kim,
    • Michael J. Bamshad,
    • Benjamin Wilfond,
    • Arno G. Motulsky,
    • C. Ronald Scott,
    • Colin C. Pritchard,
    • Tom D. Walsh,
    • Wylie Burke,
    • Wendy H. Raskind,
    • Peter Byers,
    • Fuki M. Hisama,
    • Heidi Rehm,
    • Debbie A. Nickerson,
    • and Gail P. Jarvik
    Genome Res. March 2015 25: 305-315; Published in Advance January 30, 2015, doi:10.1101/gr.183483.114
    OPEN ACCESS ARTICLE
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