Searching journal content for M R Johnson in author.

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  1. Corrigendum: Corrigendum: A mosquito small RNA genomics resource reveals dynamic evolution and host responses to viruses and transposons
    • Qicheng Ma,
    • Satyam P. Srivastav,
    • Stephanie Gamez,
    • Gargi Dayama,
    • Fabiana Feitosa-Suntheimer,
    • Edward I. Patterson,
    • Rebecca M. Johnson,
    • Erik M. Matson,
    • Alexander S. Gold,
    • Douglas E. Brackney,
    • John H. Connor,
    • Tonya M. Colpitts,
    • Grant L. Hughes,
    • Jason L. Rasgon,
    • Tony Nolan,
    • Omar S. Akbari,
    • and Nelson C. Lau
    Genome Res. January 2024 34: 160; doi:10.1101/gr.278898.123
    OPEN ACCESS ARTICLE
  2. Research: Mutability of mononucleotide repeats, not oxidative stress, explains the discrepancy between laboratory-accumulated mutations and the natural allele-frequency spectrum in C. elegans
    • Moein Rajaei,
    • Ayush Shekhar Saxena,
    • Lindsay M. Johnson,
    • Michael C. Snyder,
    • Timothy A. Crombie,
    • Robyn E. Tanny,
    • Erik C. Andersen,
    • Joanna Joyner-Matos,
    • and Charles F. Baer
    Genome Res. September 2021 31: 1602-1613; Published in Advance August 17, 2021, doi:10.1101/gr.275372.121
  3. Resource: A mosquito small RNA genomics resource reveals dynamic evolution and host responses to viruses and transposons
    • Qicheng Ma,
    • Satyam P. Srivastav,
    • Stephanie Gamez,
    • Gargi Dayama,
    • Fabiana Feitosa-Suntheimer,
    • Edward I. Patterson,
    • Rebecca M. Johnson,
    • Erik M. Matson,
    • Alexander S. Gold,
    • Douglas E. Brackney,
    • John H. Connor,
    • Tonya M. Colpitts,
    • Grant L. Hughes,
    • Jason L. Rasgon,
    • Tony Nolan,
    • Omar S. Akbari,
    • and Nelson C. Lau
    Genome Res. March 2021 31: 512-528; Published in Advance January 8, 2021, doi:10.1101/gr.265157.120
    OPEN ACCESS ARTICLE
  4. Method: Co-expression networks reveal the tissue-specific regulation of transcription and splicing
    • Ashis Saha,
    • Yungil Kim,
    • Ariel D.H. Gewirtz,
    • Brian Jo,
    • Chuan Gao,
    • Ian C. McDowell,
    • The GTEx Consortium,
    • Barbara E. Engelhardt,
    • and Alexis Battle
    Genome Res. November 2017 27: 1843-1858; Published in Advance October 11, 2017, doi:10.1101/gr.216721.116
    OPEN ACCESS ARTICLE
  5. Method: Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
    • Fan Yang,
    • Jiebiao Wang,
    • The GTEx Consortium,
    • Brandon L. Pierce,
    • and Lin S. Chen
    Genome Res. November 2017 27: 1859-1871; Published in Advance October 11, 2017, doi:10.1101/gr.216754.116
  6. Research: Genome-wide analysis of differential RNA editing in epilepsy
    • Prashant Kumar Srivastava,
    • Marta Bagnati,
    • Andree Delahaye-Duriez,
    • Jeong-Hun Ko,
    • Maxime Rotival,
    • Sarah R. Langley,
    • Kirill Shkura,
    • Manuela Mazzuferi,
    • Bénédicte Danis,
    • Jonathan van Eyll,
    • Patrik Foerch,
    • Jacques Behmoaras,
    • Rafal M. Kaminski,
    • Enrico Petretto,
    • and Michael R. Johnson
    Genome Res. March 2017 27: 440-450; doi:10.1101/gr.210740.116
    OPEN ACCESS ARTICLE
  7. Research: Functional genomic analysis of chromosomal aberrations in a compendium of 8000 cancer genomes
    • Tae-Min Kim,
    • Ruibin Xi,
    • Lovelace J. Luquette,
    • Richard W. Park,
    • Mark D. Johnson,
    • and Peter J. Park
    Genome Res. February 2013 23: 217-227; Published in Advance November 6, 2012, doi:10.1101/gr.140301.112
  8. Method: Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements
    • Anshul Kundaje,
    • Sofia Kyriazopoulou-Panagiotopoulou,
    • Max Libbrecht,
    • Cheryl L. Smith,
    • Debasish Raha,
    • Elliott E. Winters,
    • Steven M. Johnson,
    • Michael Snyder,
    • Serafim Batzoglou,
    • and Arend Sidow
    Genome Res. September 2012 22: 1735-1747; doi:10.1101/gr.136366.111
    OPEN ACCESS ARTICLE
  9. Resource: A quantitative atlas of polyadenylation in five mammals
    • Adnan Derti,
    • Philip Garrett-Engele,
    • Kenzie D. MacIsaac,
    • Richard C. Stevens,
    • Shreedharan Sriram,
    • Ronghua Chen,
    • Carol A. Rohl,
    • Jason M. Johnson,
    • and Tomas Babak
    Genome Res. June 2012 22: 1173-1183; Published in Advance March 27, 2012, doi:10.1101/gr.132563.111
    OPEN ACCESS ARTICLE
  10. Research: The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance
    • Santosh S. Atanur,
    • İnanç Birol,
    • Victor Guryev,
    • Martin Hirst,
    • Oliver Hummel,
    • Catherine Morrissey,
    • Jacques Behmoaras,
    • Xose M. Fernandez-Suarez,
    • Michelle D. Johnson,
    • William M. McLaren,
    • Giannino Patone,
    • Enrico Petretto,
    • Charles Plessy,
    • Kathleen S. Rockland,
    • Charles Rockland,
    • Kathrin Saar,
    • Yongjun Zhao,
    • Piero Carninci,
    • Paul Flicek,
    • Ted Kurtz,
    • Edwin Cuppen,
    • Michal Pravenec,
    • Norbert Hubner,
    • Steven J.M. Jones,
    • Ewan Birney,
    • and Timothy J. Aitman
    Genome Res. June 2010 20: 791-803; Published in Advance April 29, 2010, doi:10.1101/gr.103499.109
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