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Li Chen
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Method
:
TFcomb identifies transcription factor combinations for cellular reprogramming based on single-cell multiomics data
Chen Li
,
Sijie Chen
,
Yixin Chen
,
Haiyang Bian
,
Minsheng Hao
,
Lei Wei
,
and
Xuegong Zhang
Genome Res.
June 2025
35
:
1429
-
1439
;
Published in Advance
April 10, 2025
,
doi:
10.1101/gr.279955.124
Abstract
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Resource
:
Haplotype-resolved 3D chromatin architecture of the hybrid pig
Yu Lin
,
Jing Li
,
Yiren Gu
,
Long Jin
,
Jingyi Bai
,
Jiaman Zhang
,
Yujie Wang
,
Pengliang Liu
,
Keren Long
,
Mengnan He
,
Diyan Li
,
Can Liu
,
Ziyin Han
,
Yu Zhang
,
Xiaokai Li
,
Bo Zeng
,
Lu Lu
,
Fanli Kong
,
Ying Sun
,
Yongliang Fan
,
Xun Wang
,
Tao Wang
,
An'an Jiang
,
Jideng Ma
,
Linyuan Shen
,
Li Zhu
,
Yanzhi Jiang
,
Guoqing Tang
,
Xiaolan Fan
,
Qingyou Liu
,
Hua Li
,
Jinyong Wang
,
Li Chen
,
Liangpeng Ge
,
Xuewei Li
,
Qianzi Tang
,
and
Mingzhou Li
Genome Res.
February 2024
34
:
310
-
325
;
Published in Advance
March 13, 2024
,
doi:
10.1101/gr.278101.123
Abstract
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Research
:
The effect of genotype and in utero environment on interindividual variation in neonate DNA methylomes
Ai Ling Teh
,
Hong Pan
,
Li Chen
,
Mei-Lyn Ong
,
Shaillay Dogra
,
Johnny Wong
,
Julia L. MacIsaac
,
Sarah M. Mah
,
Lisa M. McEwen
,
Seang-Mei Saw
,
Keith M. Godfrey
,
Yap-Seng Chong
,
Kenneth Kwek
,
Chee-Keong Kwoh
,
Shu-E. Soh
,
Mary F.F. Chong
,
Sheila Barton
,
Neerja Karnani
,
Clara Y. Cheong
,
Jan Paul Buschdorf
,
Walter Stünkel
,
Michael S. Kobor
,
Michael J. Meaney
,
Peter D. Gluckman
,
and
Joanna D. Holbrook
Genome Res.
July 2014
24
:
1064
-
1074
;
Published in Advance
April 7, 2014
,
doi:
10.1101/gr.171439.113
Abstract
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Research
:
Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome
Guojie Zhang
,
Guangwu Guo
,
Xueda Hu
,
Yong Zhang
,
Qiye Li
,
Ruiqiang Li
,
Ruhong Zhuang
,
Zhike Lu
,
Zengquan He
,
Xiaodong Fang
,
Li Chen
,
Wei Tian
,
Yong Tao
,
Karsten Kristiansen
,
Xiuqing Zhang
,
Songgang Li
,
Huanming Yang
,
Jian Wang
,
and
Jun Wang
Genome Res.
May 2010
20
:
646
-
654
;
Published in Advance
March 19, 2010
,
doi:
10.1101/gr.100677.109
Abstract
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March 2026, 36 (3)
In This Issue
Single-cell gene signature scoring
Chromosome engineering in 8p syndrome
Convergent evolution in arid rodents
Short tandem repeat genotyping using long reads
Spectral component approach for recent population structure
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