Searching journal content for Len A. Pennacchio in author.

Displaying results 1-6 of 6
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  1. Research: Comprehensive identification and analysis of human accelerated regulatory DNA
    • Rachel M. Gittelman,
    • Enna Hun,
    • Ferhat Ay,
    • Jennifer Madeoy,
    • Len Pennacchio,
    • William S. Noble,
    • R. David Hawkins,
    • and Joshua M. Akey
    Genome Res. September 2015 25: 1245-1255; Published in Advance June 23, 2015, doi:10.1101/gr.192591.115
  2. Research: Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis
    • Catia Attanasio,
    • Alex S. Nord,
    • Yiwen Zhu,
    • Matthew J. Blow,
    • Simon C. Biddie,
    • Eric M. Mendenhall,
    • Jesse Dixon,
    • Crystal Wright,
    • Roya Hosseini,
    • Jennifer A. Akiyama,
    • Amy Holt,
    • Ingrid Plajzer-Frick,
    • Malak Shoukry,
    • Veena Afzal,
    • Bing Ren,
    • Bradley E. Bernstein,
    • Edward M. Rubin,
    • Axel Visel,
    • and Len A. Pennacchio
    Genome Res. June 2014 24: 920-929; Published in Advance April 21, 2014, doi:10.1101/gr.168930.113
  3. Research: Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers
    • Valer Gotea,
    • Axel Visel,
    • John M. Westlund,
    • Marcelo A. Nobrega,
    • Len A. Pennacchio,
    • and Ivan Ovcharenko
    Genome Res. May 2010 20: 565-577; Published in Advance April 2, 2010, doi:10.1101/gr.104471.109
    OPEN ACCESS ARTICLE
  4. LETTER: The amphioxus genome illuminates vertebrate origins and cephalochordate biology
    • Linda Z. Holland,
    • Ricard Albalat,
    • Kaoru Azumi,
    • Èlia Benito-Gutiérrez,
    • Matthew J. Blow,
    • Marianne Bronner-Fraser,
    • Frederic Brunet,
    • Thomas Butts,
    • Simona Candiani,
    • Larry J. Dishaw,
    • David E.K. Ferrier,
    • Jordi Garcia-Fernàndez,
    • Jeremy J. Gibson-Brown,
    • Carmela Gissi,
    • Adam Godzik,
    • Finn Hallböök,
    • Dan Hirose,
    • Kazuyoshi Hosomichi,
    • Tetsuro Ikuta,
    • Hidetoshi Inoko,
    • Masanori Kasahara,
    • Jun Kasamatsu,
    • Takeshi Kawashima,
    • Ayuko Kimura,
    • Masaaki Kobayashi,
    • Zbynek Kozmik,
    • Kaoru Kubokawa,
    • Vincent Laudet,
    • Gary W. Litman,
    • Alice C. McHardy,
    • Daniel Meulemans,
    • Masaru Nonaka,
    • Robert P. Olinski,
    • Zeev Pancer,
    • Len A. Pennacchio,
    • Mario Pestarino,
    • Jonathan P. Rast,
    • Isidore Rigoutsos,
    • Marc Robinson-Rechavi,
    • Graeme Roch,
    • Hidetoshi Saiga,
    • Yasunori Sasakura,
    • Masanobu Satake,
    • Yutaka Satou,
    • Michael Schubert,
    • Nancy Sherwood,
    • Takashi Shiina,
    • Naohito Takatori,
    • Javier Tello,
    • Pavel Vopalensky,
    • Shuichi Wada,
    • Anlong Xu,
    • Yuzhen Ye,
    • Keita Yoshida,
    • Fumiko Yoshizaki,
    • Jr-Kai Yu,
    • Qing Zhang,
    • Christian M. Zmasek,
    • Pieter J. de Jong,
    • Kazutoyo Osoegawa,
    • Nicholas H. Putnam,
    • Daniel S. Rokhsar,
    • Noriyuki Satoh,
    • and Peter W.H. Holland
    Genome Res. July 2008 18: 1100-1111; Published in Advance June 18, 2008, doi:10.1101/gr.073676.107
  5. Methods: Predicting tissue-specific enhancers in the human genome
    • Len A. Pennacchio,
    • Gabriela G. Loots,
    • Marcelo A. Nobrega,
    • and Ivan Ovcharenko
    Genome Res. February 2007 17: 201-211; Published in Advance January 8, 2007, doi:10.1101/gr.5972507
    OPEN ACCESS ARTICLE
  6. LETTER: Close sequence comparisons are sufficient to identify human cis-regulatory elements
    • Shyam Prabhakar,
    • Francis Poulin,
    • Malak Shoukry,
    • Veena Afzal,
    • Edward M. Rubin,
    • Olivier Couronne,
    • and Len A. Pennacchio
    Genome Res. July 2006 16: 855-863; Published in Advance June 12, 2006, doi:10.1101/gr.4717506
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