Searching journal content for Laura Clarke in author.

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  1. Research: Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes
    • David Thybert,
    • Maša Roller,
    • Fábio C.P. Navarro,
    • Ian Fiddes,
    • Ian Streeter,
    • Christine Feig,
    • David Martin-Galvez,
    • Mikhail Kolmogorov,
    • Václav Janoušek,
    • Wasiu Akanni,
    • Bronwen Aken,
    • Sarah Aldridge,
    • Varshith Chakrapani,
    • William Chow,
    • Laura Clarke,
    • Carla Cummins,
    • Anthony Doran,
    • Matthew Dunn,
    • Leo Goodstadt,
    • Kerstin Howe,
    • Matthew Howell,
    • Ambre-Aurore Josselin,
    • Robert C. Karn,
    • Christina M. Laukaitis,
    • Lilue Jingtao,
    • Fergal Martin,
    • Matthieu Muffato,
    • Stefanie Nachtweide,
    • Michael A. Quail,
    • Cristina Sisu,
    • Mario Stanke,
    • Klara Stefflova,
    • Cock Van Oosterhout,
    • Frederic Veyrunes,
    • Ben Ward,
    • Fengtang Yang,
    • Golbahar Yazdanifar,
    • Amonida Zadissa,
    • David J. Adams,
    • Alvis Brazma,
    • Mark Gerstein,
    • Benedict Paten,
    • Son Pham,
    • Thomas M. Keane,
    • Duncan T. Odom,
    • and Paul Flicek
    Genome Res. April 2018 28: 448-459; Published in Advance March 21, 2018, doi:10.1101/gr.234096.117
    OPEN ACCESS ARTICLE
  2. Resource: Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
    • Valerie A. Schneider,
    • Tina Graves-Lindsay,
    • Kerstin Howe,
    • Nathan Bouk,
    • Hsiu-Chuan Chen,
    • Paul A. Kitts,
    • Terence D. Murphy,
    • Kim D. Pruitt,
    • Françoise Thibaud-Nissen,
    • Derek Albracht,
    • Robert S. Fulton,
    • Milinn Kremitzki,
    • Vincent Magrini,
    • Chris Markovic,
    • Sean McGrath,
    • Karyn Meltz Steinberg,
    • Kate Auger,
    • William Chow,
    • Joanna Collins,
    • Glenn Harden,
    • Timothy Hubbard,
    • Sarah Pelan,
    • Jared T. Simpson,
    • Glen Threadgold,
    • James Torrance,
    • Jonathan M. Wood,
    • Laura Clarke,
    • Sergey Koren,
    • Matthew Boitano,
    • Paul Peluso,
    • Heng Li,
    • Chen-Shan Chin,
    • Adam M. Phillippy,
    • Richard Durbin,
    • Richard K. Wilson,
    • Paul Flicek,
    • Evan E. Eichler,
    • and Deanna M. Church
    Genome Res. May 2017 27: 849-864; Published in Advance April 10, 2017, doi:10.1101/gr.213611.116
    OPEN ACCESS ARTICLE
  3. Research: Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers
    • Xabier Agirre,
    • Giancarlo Castellano,
    • Marien Pascual,
    • Simon Heath,
    • Marta Kulis,
    • Victor Segura,
    • Anke Bergmann,
    • Anna Esteve,
    • Angelika Merkel,
    • Emanuele Raineri,
    • Lidia Agueda,
    • Julie Blanc,
    • David Richardson,
    • Laura Clarke,
    • Avik Datta,
    • Nuria Russiñol,
    • Ana C. Queirós,
    • Renée Beekman,
    • Juan R. Rodríguez-Madoz,
    • Edurne San José-Enériz,
    • Fang Fang,
    • Norma C. Gutiérrez,
    • José M. García-Verdugo,
    • Michael I. Robson,
    • Eric C. Schirmer,
    • Elisabeth Guruceaga,
    • Joost H.A. Martens,
    • Marta Gut,
    • Maria J. Calasanz,
    • Paul Flicek,
    • Reiner Siebert,
    • Elías Campo,
    • Jesús F. San Miguel,
    • Ari Melnick,
    • Hendrik G. Stunnenberg,
    • Ivo G. Gut,
    • Felipe Prosper,
    • and José I. Martín-Subero
    Genome Res. April 2015 25: 478-487; Published in Advance February 2, 2015, doi:10.1101/gr.180240.114
  4. ENSEMBL Special: The Ensembl Analysis Pipeline
    • Simon C. Potter,
    • Laura Clarke,
    • Val Curwen,
    • Stephen Keenan,
    • Emmanuel Mongin,
    • Stephen M.J. Searle,
    • Arne Stabenau,
    • Roy Storey,
    • and Michele Clamp
    Genome Res. May 2004 14: 934-941; doi:10.1101/gr.1859804
  5. ENSEMBL Special: The Ensembl Automatic Gene Annotation System
    • Val Curwen,
    • Eduardo Eyras,
    • T. Daniel Andrews,
    • Laura Clarke,
    • Emmanuel Mongin,
    • Steven M.J. Searle,
    • and Michele Clamp
    Genome Res. May 2004 14: 942-950; doi:10.1101/gr.1858004
  6. ENSEMBL Special: An Overview of Ensembl
    • Ewan Birney,
    • T. Daniel Andrews,
    • Paul Bevan,
    • Mario Caccamo,
    • Yuan Chen,
    • Laura Clarke,
    • Guy Coates,
    • James Cuff,
    • Val Curwen,
    • Tim Cutts,
    • Thomas Down,
    • Eduardo Eyras,
    • Xose M. Fernandez-Suarez,
    • Paul Gane,
    • Brian Gibbins,
    • James Gilbert,
    • Martin Hammond,
    • Hans-Rudolf Hotz,
    • Vivek Iyer,
    • Kerstin Jekosch,
    • Andreas Kahari,
    • Arek Kasprzyk,
    • Damian Keefe,
    • Stephen Keenan,
    • Heikki Lehvaslaiho,
    • Graham McVicker,
    • Craig Melsopp,
    • Patrick Meidl,
    • Emmanuel Mongin,
    • Roger Pettett,
    • Simon Potter,
    • Glenn Proctor,
    • Mark Rae,
    • Steve Searle,
    • Guy Slater,
    • Damian Smedley,
    • James Smith,
    • Will Spooner,
    • Arne Stabenau,
    • James Stalker,
    • Roy Storey,
    • Abel Ureta-Vidal,
    • K. Cara Woodwark,
    • Graham Cameron,
    • Richard Durbin,
    • Anthony Cox,
    • Tim Hubbard,
    • and Michele Clamp
    Genome Res. May 2004 14: 925-928; Published in Advance April 12, 2004, doi:10.1101/gr.1860604
  7. Methods: Biopipe: A Flexible Framework for Protocol-Based Bioinformatics Analysis
    • Shawn Hoon,
    • Kiran Kumar Ratnapu,
    • Jer-ming Chia,
    • Balamurugan Kumarasamy,
    • Xiao Juguang,
    • Michele Clamp,
    • Arne Stabenau,
    • Simon Potter,
    • Laura Clarke,
    • and Elia Stupka
    Genome Res. August 2003 13: 1904-1915; Published in Advance July 17, 2003, doi:10.1101/gr.1363103
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