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Kevin McKernan
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Research
:
Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells
Gabriel Kolle
,
Jill L. Shepherd
,
Brooke Gardiner
,
Karin S. Kassahn
,
Nicole Cloonan
,
David L.A. Wood
,
Ehsan Nourbakhsh
,
Darrin F. Taylor
,
Shivangi Wani
,
Hun S. Chy
,
Qi Zhou
,
Kevin McKernan
,
Scott Kuersten
,
Andrew L. Laslett
,
and
Sean M. Grimmond
Genome Res.
December 2011
21
:
2014
-
2025
;
Published in Advance
October 31, 2011
,
doi:
10.1101/gr.119321.110
Abstract
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Methods
:
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding
Kevin Judd McKernan
,
Heather E. Peckham
,
Gina L. Costa
,
Stephen F. McLaughlin
,
Yutao Fu
,
Eric F. Tsung
,
Christopher R. Clouser
,
Cisyla Duncan
,
Jeffrey K. Ichikawa
,
Clarence C. Lee
,
Zheng Zhang
,
Swati S. Ranade
,
Eileen T. Dimalanta
,
Fiona C. Hyland
,
Tanya D. Sokolsky
,
Lei Zhang
,
Andrew Sheridan
,
Haoning Fu
,
Cynthia L. Hendrickson
,
Bin Li
,
Lev Kotler
,
Jeremy R. Stuart
,
Joel A. Malek
,
Jonathan M. Manning
,
Alena A. Antipova
,
Damon S. Perez
,
Michael P. Moore
,
Kathleen C. Hayashibara
,
Michael R. Lyons
,
Robert E. Beaudoin
,
Brittany E. Coleman
,
Michael W. Laptewicz
,
Adam E. Sannicandro
,
Michael D. Rhodes
,
Rajesh K. Gottimukkala
,
Shan Yang
,
Vineet Bafna
,
Ali Bashir
,
Andrew MacBride
,
Can Alkan
,
Jeffrey M. Kidd
,
Evan E. Eichler
,
Martin G. Reese
,
Francisco M. De La Vega
,
and
Alan P. Blanchard
Genome Res.
September 2009
19
:
1527
-
1541
;
Published in Advance
June 22, 2009
,
doi:
10.1101/gr.091868.109
Abstract
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Methods
:
Rapid whole-genome mutational profiling using next-generation sequencing technologies
Douglas R. Smith
,
Aaron R. Quinlan
,
Heather E. Peckham
,
Kathryn Makowsky
,
Wei Tao
,
Betty Woolf
,
Lei Shen
,
William F. Donahue
,
Nadeem Tusneem
,
Michael P. Stromberg
,
Donald A. Stewart
,
Lu Zhang
,
Swati S. Ranade
,
Jason B. Warner
,
Clarence C. Lee
,
Brittney E. Coleman
,
Zheng Zhang
,
Stephen F. McLaughlin
,
Joel A. Malek
,
Jon M. Sorenson
,
Alan P. Blanchard
,
Jarrod Chapman
,
David Hillman
,
Feng Chen
,
Daniel S. Rokhsar
,
Kevin J. McKernan
,
Thomas W. Jeffries
,
Gabor T. Marth
,
and
Paul M. Richardson
Genome Res.
October 2008
18
:
1638
-
1642
;
Published in Advance
September 4, 2008
,
doi:
10.1101/gr.077776.108
Abstract
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LETTER
:
A high-resolution, nucleosome position map of
C. elegans
reveals a lack of universal sequence-dictated positioning
Anton Valouev
,
Jeffrey Ichikawa
,
Thaisan Tonthat
,
Jeremy Stuart
,
Swati Ranade
,
Heather Peckham
,
Kathy Zeng
,
Joel A. Malek
,
Gina Costa
,
Kevin McKernan
,
Arend Sidow
,
Andrew Fire
,
and
Steven M. Johnson
Genome Res.
July 2008
18
:
1051
-
1063
;
Published in Advance
May 13, 2008
,
doi:
10.1101/gr.076463.108
Abstract
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ARTICLE
:
The Genome of
M. acetivorans
Reveals Extensive Metabolic and Physiological Diversity
James E. Galagan
,
Chad Nusbaum
,
Alice Roy
,
Matthew G. Endrizzi
,
Pendexter Macdonald
,
Will FitzHugh
,
Sarah Calvo
,
Reinhard Engels
,
Serge Smirnov
,
Deven Atnoor
,
Adam Brown
,
Nicole Allen
,
Jerome Naylor
,
Nicole Stange-Thomann
,
Kurt DeArellano
,
Robin Johnson
,
Lauren Linton
,
Paul McEwan
,
Kevin McKernan
,
Jessica Talamas
,
Andrea Tirrell
,
Wenjuan Ye
,
Andrew Zimmer
,
Robert D. Barber
,
Isaac Cann
,
David E. Graham
,
David A. Grahame
,
Adam M. Guss
,
Reiner Hedderich
,
Cheryl Ingram-Smith
,
H. Craig Kuettner
,
Joseph A. Krzycki
,
John A. Leigh
,
Weixi Li
,
Jinfeng Liu
,
Biswarup Mukhopadhyay
,
John N. Reeve
,
Kerry Smith
,
Timothy A. Springer
,
Lowell A. Umayam
,
Owen White
,
Robert H. White
,
Everly Conway de Macario
,
James G. Ferry
,
Ken F. Jarrell
,
Hua Jing
,
Alberto J.L. Macario
,
Ian Paulsen
,
Matthew Pritchett
,
Kevin R. Sowers
,
Ronald V. Swanson
,
Steven H. Zinder
,
Eric Lander
,
William W. Metcalf
,
and
Bruce Birren
Genome Res.
April 1, 2002
12
:
532
-
542
;
doi:
10.1101/gr.223902
Abstract
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