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Kai Ye
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Method
:
Highly accurate assembly polishing with DeepPolisher
Mira Mastoras
,
Mobin Asri
,
Lucas Brambrink
,
Prajna Hebbar
,
Alexey Kolesnikov
,
Daniel E. Cook
,
Maria Nattestad
,
Julian Lucas
,
Taylor S. Won
,
Pi-Chuan Chang
,
Andrew Carroll
,
Benedict Paten
,
Kishwar Shafin
,
and
and the Human Pangenome Reference Consortium
Genome Res.
July 2025
35
:
1595
-
1608
;
Published in Advance
May 19, 2025
,
doi:
10.1101/gr.280149.124
Abstract
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Resource
:
GenomeVIP: a cloud platform for genomic variant discovery and interpretation
R. Jay Mashl
,
Adam D. Scott
,
Kuan-lin Huang
,
Matthew A. Wyczalkowski
,
Christopher J. Yoon
,
Beifang Niu
,
Erin DeNardo
,
Venkata D. Yellapantula
,
Robert E. Handsaker
,
Ken Chen
,
Daniel C. Koboldt
,
Kai Ye
,
David Fenyö
,
Benjamin J. Raphael
,
Michael C. Wendl
,
and
Li Ding
Genome Res.
August 2017
27
:
1450
-
1459
;
Published in Advance
May 18, 2017
,
doi:
10.1101/gr.211656.116
Abstract
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Research
:
Characteristics of de novo structural changes in the human genome
Wigard P. Kloosterman
,
Laurent C. Francioli
,
Fereydoun Hormozdiari
,
Tobias Marschall
,
Jayne Y. Hehir-Kwa
,
Abdel Abdellaoui
,
Eric-Wubbo Lameijer
,
Matthijs H. Moed
,
Vyacheslav Koval
,
Ivo Renkens
,
Markus J. van Roosmalen
,
Pascal Arp
,
Lennart C. Karssen
,
Bradley P. Coe
,
Robert E. Handsaker
,
Eka D. Suchiman
,
Edwin Cuppen
,
Djie Tjwan Thung
,
Mitch McVey
,
Michael C. Wendl
,
Genome of the Netherlands Consortium
,
André Uitterlinden
,
Cornelia M. van Duijn
,
Morris A. Swertz
,
Cisca Wijmenga
,
GertJan B. van Ommen
,
P. Eline Slagboom
,
Dorret I. Boomsma
,
Alexander Schönhuth
,
Evan E. Eichler
,
Paul I.W. de Bakker
,
Kai Ye
,
and
Victor Guryev
Genome Res.
June 2015
25
:
792
-
801
;
Published in Advance
April 16, 2015
,
doi:
10.1101/gr.185041.114
Abstract
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Single-cell gene signature scoring
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