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K Li
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Research
:
Analyzing super-enhancer temporal dynamics reveals potential critical enhancers and their gene regulatory networks underlying skeletal muscle development
Song Zhang
,
Chao Wang
,
Shenghua Qin
,
Choulin Chen
,
Yongzhou Bao
,
Yuanyuan Zhang
,
Lingna Xu
,
Qingyou Liu
,
Yunxiang Zhao
,
Kui Li
,
Zhonglin Tang
,
and
Yuwen Liu
Genome Res.
December 2024
34
:
2190
-
2202
;
Published in Advance
October 21, 2024
,
doi:
10.1101/gr.278344.123
Abstract
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Resource
:
Construction and evaluation of a new rat reference genome assembly, GRCr8, from long reads and long-range scaffolding
Kai Li
,
Melissa L. Smith
,
J. Chris Blazier
,
Kelli J. Kochan
,
Jonathan M.D. Wood
,
Kerstin Howe
,
Anne E. Kwitek
,
Melinda R. Dwinell
,
Hao Chen
,
Julia L. Ciosek
,
Patrick Masterson
,
Terence D. Murphy
,
Theodore S. Kalbfleisch
,
and
Peter A. Doris
Genome Res.
November 2024
34
:
2081
-
2093
;
Published in Advance
November 8, 2024
,
doi:
10.1101/gr.279292.124
Abstract
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Method
:
Classification and clustering of RNA crosslink-ligation data reveal complex structures and homodimers
Minjie Zhang
,
Irena T. Hwang
,
Kongpan Li
,
Jianhui Bai
,
Jian-Fu Chen
,
Tsachy Weissman
,
James Y. Zou
,
and
Zhipeng Lu
Genome Res.
May 2022
32
:
968
-
985
;
Published in Advance
March 24, 2022
,
doi:
10.1101/gr.275979.121
Abstract
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Research
:
Improved redox homeostasis owing to the up-regulation of one-carbon metabolism and related pathways is crucial for yeast heterosis at high temperature
Liang Song
,
Jun-Yan Shi
,
Shou-Fu Duan
,
Da-Yong Han
,
Kuan Li
,
Ri-Peng Zhang
,
Peng-Yu He
,
Pei-Jie Han
,
Qi-Ming Wang
,
and
Feng-Yan Bai
Genome Res.
April 2021
31
:
622
-
634
;
Published in Advance
March 15, 2021
,
doi:
10.1101/gr.262055.120
Abstract
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Research
:
Panoramic transcriptome analysis and functional screening of long noncoding RNAs in mouse spermatogenesis
Kai Li
,
Jiayue Xu
,
Yanyun Luo
,
Dingfeng Zou
,
Ruiqin Han
,
Shunshun Zhong
,
Qing Zhao
,
Xinyu Mang
,
Mengzhen Li
,
Yanmin Si
,
Yan Lu
,
Pengyu Li
,
Cheng Jin
,
Zhipeng Wang
,
Fang Wang
,
Shiying Miao
,
Bo Wen
,
Linfang Wang
,
Yanni Ma
,
Jia Yu
,
and
Wei Song
Genome Res.
January 2021
31
:
13
-
26
;
Published in Advance
December 16, 2020
,
doi:
10.1101/gr.264333.120
Abstract
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Resource
:
Systematic genome editing of the genes on zebrafish Chromosome 1 by CRISPR/Cas9
Yonghua Sun
,
Bo Zhang
,
Lingfei Luo
,
De-Li Shi
,
Han Wang
,
Zongbin Cui
,
Honghui Huang
,
Ying Cao
,
Xiaodong Shu
,
Wenqing Zhang
,
Jianfeng Zhou
,
Yun Li
,
Jiulin Du
,
Qingshun Zhao
,
Jun Chen
,
Hanbing Zhong
,
Tao P. Zhong
,
Li Li
,
Jing-Wei Xiong
,
Jinrong Peng
,
Wuhan Xiao
,
Jian Zhang
,
Jihua Yao
,
Zhan Yin
,
Xianming Mo
,
Gang Peng
,
Jun Zhu
,
Yan Chen
,
Yong Zhou
,
Dong Liu
,
Weijun Pan
,
Yiyue Zhang
,
Hua Ruan
,
Feng Liu
,
Zuoyan Zhu
,
Anming Meng
,
and
The ZAKOC Consortium
Genome Res.
January 2020
30
:
118
-
126
;
Published in Advance
December 12, 2019
,
doi:
10.1101/gr.248559.119
Abstract
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Research
:
Synchronized replication of genes encoding the same protein complex in fast-proliferating cells
Ying Chen
,
Ke Li
,
Xiao Chu
,
Lucas B. Carey
,
and
Wenfeng Qian
Genome Res.
December 2019
29
:
1929
-
1938
;
Published in Advance
October 29, 2019
,
doi:
10.1101/gr.254342.119
Abstract
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LETTER
:
Haplotype variation in structure and expression of a gene cluster associated with a quantitative trait locus for improved yield in rice
Guangming He
,
Xiaojin Luo
,
Feng Tian
,
Kegui Li
,
Zuofeng Zhu
,
Wei Su
,
Xiaoyin Qian
,
Yongcai Fu
,
Xiangkun Wang
,
Chuanqing Sun
,
and
Jinshui Yang
Genome Res.
May 2006
16
:
618
-
626
;
Published in Advance
April 10, 2006
,
doi:
10.1101/gr.4814006
Abstract
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ARTICLES
:
An integrated YAC map of the human X chromosome.
H Roest Crollius
,
M T Ross
,
A Grigoriev
,
C J Knights
,
E Holloway
,
J Misfud
,
K Li
,
M Playford
,
S G Gregory
,
S J Humphray
,
A J Coffey
,
C G See
,
S Marsh
,
R Vatcheva
,
J Kumlien
,
T Labella
,
V Lam
,
K H Rak
,
K Todd
,
R Mott
,
D Graeser
,
G Rappold
,
G Zehetner
,
A Poustka
,
and
H Lehrach
Genome Res.
October 1996
6
:
943
-
955
;
doi:
10.1101/gr.6.10.943
Abstract
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Cross-modality translation in single-cell multiomics
Long-read sequencing of small supernumerary marker chromosomes
Somatic mutant alleles in bulk tumor samples
Honey bee gut microbiota and RNA editing
Substantia nigra aging in Parkinson's disease
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