Searching journal content for Jun Li in author.

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  1. Research: Extreme heterochiasmy and high rates of sex-reversed recombination result in large yet homomorphic sex chromosomes in the Emei moustache toad
    • Siyu Xie,
    • Jun Li,
    • Wanyan Chen,
    • Lydia J.M. Fong,
    • Chunhua Huang,
    • Yan Feng,
    • Qingbo Ai,
    • Mian Zhao,
    • Judith E. Mank,
    • and Hua Wu
    Genome Res. June 2025 35: 1325-1336; Published in Advance April 24, 2025, doi:10.1101/gr.280161.124
  2. Method: Nanopore strand-specific mismatch enables de novo detection of bacterial DNA modifications
    • Xudong Liu,
    • Ying Ni,
    • Lianwei Ye,
    • Zhihao Guo,
    • Lu Tan,
    • Jun Li,
    • Mengsu Yang,
    • Sheng Chen,
    • and Runsheng Li
    Genome Res. November 2024 34: 2025-2038; Published in Advance October 2, 2024, doi:10.1101/gr.279012.124
  3. Method: Ultrafast and scalable variant annotation and prioritization with big functional genomics data
    • Dandan Huang,
    • Xianfu Yi,
    • Yao Zhou,
    • Hongcheng Yao,
    • Hang Xu,
    • Jianhua Wang,
    • Shijie Zhang,
    • Wenyan Nong,
    • Panwen Wang,
    • Lei Shi,
    • Chenghao Xuan,
    • Miaoxin Li,
    • Junwen Wang,
    • Weidong Li,
    • Hoi Shan Kwan,
    • Pak Chung Sham,
    • Kai Wang,
    • and Mulin Jun Li
    Genome Res. December 2020 30: 1789-1801; Published in Advance October 15, 2020, doi:10.1101/gr.267997.120
  4. Resource: Comprehensive analyses of 723 transcriptomes enhance genetic and biological interpretations for complex traits in cattle
    • Lingzhao Fang,
    • Wentao Cai,
    • Shuli Liu,
    • Oriol Canela-Xandri,
    • Yahui Gao,
    • Jicai Jiang,
    • Konrad Rawlik,
    • Bingjie Li,
    • Steven G. Schroeder,
    • Benjamin D. Rosen,
    • Cong-jun Li,
    • Tad S. Sonstegard,
    • Leeson J. Alexander,
    • Curtis P. Van Tassell,
    • Paul M. VanRaden,
    • John B. Cole,
    • Ying Yu,
    • Shengli Zhang,
    • Albert Tenesa,
    • Li Ma,
    • and George E. Liu
    Genome Res. May 2020 30: 790-801; Published in Advance May 18, 2020, doi:10.1101/gr.250704.119
  5. Research: Systematic characterization of A-to-I RNA editing hotspots in microRNAs across human cancers
    • Yumeng Wang,
    • Xiaoyan Xu,
    • Shuangxing Yu,
    • Kang Jin Jeong,
    • Zhicheng Zhou,
    • Leng Han,
    • Yiu Huen Tsang,
    • Jun Li,
    • Hu Chen,
    • Lingegowda S. Mangala,
    • Yuan Yuan,
    • A. Karina Eterovic,
    • Yiling Lu,
    • Anil K. Sood,
    • Kenneth L. Scott,
    • Gordon B. Mills,
    • and Han Liang
    Genome Res. July 2017 27: 1112-1125; Published in Advance April 14, 2017, doi:10.1101/gr.219741.116
  6. Research: The influence of genomic context on mutation patterns in the human genome inferred from rare variants
    • Valerie M. Schaibley,
    • Matthew Zawistowski,
    • Daniel Wegmann,
    • Margaret G. Ehm,
    • Matthew R. Nelson,
    • Pamela L. St. Jean,
    • Gonçalo R. Abecasis,
    • John Novembre,
    • Sebastian Zöllner,
    • and Jun Z. Li
    Genome Res. December 2013 23: 1974-1984; Published in Advance August 29, 2013, doi:10.1101/gr.154971.113
  7. Method: Digital gene expression for non-model organisms
    • Lewis Z. Hong,
    • Jun Li,
    • Anne Schmidt-Küntzel,
    • Wesley C. Warren,
    • and Gregory S. Barsh
    Genome Res. November 2011 21: 1905-1915; Published in Advance August 15, 2011, doi:10.1101/gr.122135.111
  8. Letter: Signals of recent positive selection in a worldwide sample of human populations
    • Joseph K. Pickrell,
    • Graham Coop,
    • John Novembre,
    • Sridhar Kudaravalli,
    • Jun Z. Li,
    • Devin Absher,
    • Balaji S. Srinivasan,
    • Gregory S. Barsh,
    • Richard M. Myers,
    • Marcus W. Feldman,
    • and Jonathan K. Pritchard
    Genome Res. May 2009 19: 826-837; Published in Advance March 23, 2009, doi:10.1101/gr.087577.108
    OPEN ACCESS ARTICLE
  9. LETTER: Genomic analysis of the immune gene repertoire of amphioxus reveals extraordinary innate complexity and diversity
    • Shengfeng Huang,
    • Shaochun Yuan,
    • Lei Guo,
    • Yanhong Yu,
    • Jun Li,
    • Tao Wu,
    • Tong Liu,
    • Manyi Yang,
    • Kui Wu,
    • Huiling Liu,
    • Jin Ge,
    • Yingcai Yu,
    • Huiqing Huang,
    • Meiling Dong,
    • Cuiling Yu,
    • Shangwu Chen,
    • and Anlong Xu
    Genome Res. July 2008 18: 1112-1126; Published in Advance June 18, 2008, doi:10.1101/gr.069674.107
  10. LETTER: Origin and evolution of new exons in rodents
    • Wen Wang,
    • Hongkun Zheng,
    • Shuang Yang,
    • Haijing Yu,
    • Jun Li,
    • Huifeng Jiang,
    • Jianning Su,
    • Lei Yang,
    • Jianguo Zhang,
    • Jason McDermott,
    • Ram Samudrala,
    • Jian Wang,
    • Huanming Yang,
    • Jun Yu,
    • Karsten Kristiansen,
    • Gane Ka-Shu Wong,
    • and Jun Wang
    Genome Res. September 2005 15: 1258-1264; Published in Advance August 18, 2005, doi:10.1101/gr.3929705
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