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Joshua M. Akey
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Displaying results 1-10 of
17
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Research
:
Deep sequencing of 1320 genes reveals the landscape of protein-truncating variants and their contribution to psoriasis in 19,973 Chinese individuals
Huixin Xu
,
Qi Zhen
,
Mingzhou Bai
,
Lin Fang
,
Yong Zhang
,
Bao Li
,
Huiyao Ge
,
Sunjin Moon
,
Weiwei Chen
,
Wenqing Fu
,
Qiongqiong Xu
,
Yuwen Zhou
,
Yafeng Yu
,
Long Lin
,
Liang Yong
,
Tao Zhang
,
Shirui Chen
,
Siyang Liu
,
Hui Zhang
,
Ruoyan Chen
,
Lu Cao
,
Yuanwei Zhang
,
Ruixue Zhang
,
Huanjie Yang
,
Xia Hu
,
Joshua M. Akey
,
Xin Jin
,
and
Liangdan Sun
Genome Res.
July 2021
31
:
1150
-
1158
;
Published in Advance
June 21, 2021
,
doi:
10.1101/gr.267963.120
Abstract
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Research
:
Massive variation of short tandem repeats with functional consequences across strains of
Arabidopsis thaliana
Maximilian O. Press
,
Rajiv C. McCoy
,
Ashley N. Hall
,
Joshua M. Akey
,
and
Christine Queitsch
Genome Res.
August 2018
28
:
1169
-
1178
;
Published in Advance
July 3, 2018
,
doi:
10.1101/gr.231753.117
Abstract
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Method
:
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
Ashis Saha
,
Yungil Kim
,
Ariel D.H. Gewirtz
,
Brian Jo
,
Chuan Gao
,
Ian C. McDowell
,
The GTEx Consortium
,
Barbara E. Engelhardt
,
and
Alexis Battle
Genome Res.
November 2017
27
:
1843
-
1858
;
Published in Advance
October 11, 2017
,
doi:
10.1101/gr.216721.116
Abstract
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Method
:
Identifying
cis
-mediators for
trans
-eQTLs across many human tissues using genomic mediation analysis
Fan Yang
,
Jiebiao Wang
,
The GTEx Consortium
,
Brandon L. Pierce
,
and
Lin S. Chen
Genome Res.
November 2017
27
:
1859
-
1871
;
Published in Advance
October 11, 2017
,
doi:
10.1101/gr.216754.116
Abstract
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Method
:
A flexible method for estimating the fraction of fitness influencing mutations from large sequencing data sets
Sunjin Moon
and
Joshua M. Akey
Genome Res.
June 2016
26
:
834
-
843
;
Published in Advance
April 14, 2016
,
doi:
10.1101/gr.203059.115
Abstract
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Research
:
Comprehensive identification and analysis of human accelerated regulatory DNA
Rachel M. Gittelman
,
Enna Hun
,
Ferhat Ay
,
Jennifer Madeoy
,
Len Pennacchio
,
William S. Noble
,
R. David Hawkins
,
and
Joshua M. Akey
Genome Res.
September 2015
25
:
1245
-
1255
;
Published in Advance
June 23, 2015
,
doi:
10.1101/gr.192591.115
Abstract
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Research
:
Heritable variation of mRNA decay rates in yeast
Jennifer M. Andrie
,
Jon Wakefield
,
and
Joshua M. Akey
Genome Res.
December 2014
24
:
2000
-
2010
;
Published in Advance
September 25, 2014
,
doi:
10.1101/gr.175802.114
Abstract
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Research
:
Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast
Daniel A. Skelly
,
Gennifer E. Merrihew
,
Michael Riffle
,
Caitlin F. Connelly
,
Emily O. Kerr
,
Marnie Johansson
,
Daniel Jaschob
,
Beth Graczyk
,
Nicholas J. Shulman
,
Jon Wakefield
,
Sara J. Cooper
,
Stanley Fields
,
William S. Noble
,
Eric G.D. Muller
,
Trisha N. Davis
,
Maitreya J. Dunham
,
Michael J. MacCoss
,
and
Joshua M. Akey
Genome Res.
September 2013
23
:
1496
-
1504
;
Published in Advance
May 29, 2013
,
doi:
10.1101/gr.155762.113
Abstract
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Research
:
Personal and population genomics of human regulatory variation
Benjamin Vernot
,
Andrew B. Stergachis
,
Matthew T. Maurano
,
Jeff Vierstra
,
Shane Neph
,
Robert E. Thurman
,
John A. Stamatoyannopoulos
,
and
Joshua M. Akey
Genome Res.
September 2012
22
:
1689
-
1697
;
doi:
10.1101/gr.134890.111
Abstract
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Method
:
A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data
Daniel A. Skelly
,
Marnie Johansson
,
Jennifer Madeoy
,
Jon Wakefield
,
and
Joshua M. Akey
Genome Res.
October 2011
21
:
1728
-
1737
;
Published in Advance
August 26, 2011
,
doi:
10.1101/gr.119784.110
Abstract
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