Searching journal content for Joseph R. Ecker in author.

Displaying results 1-7 of 7
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  1. Resource: Streamlined spatial and environmental expression signatures characterize the minimalist duckweed Wolffia australiana
    • Tom Denyer,
    • Pin-Jou Wu,
    • Kelly Colt,
    • Bradley W. Abramson,
    • Zhili Pang,
    • Pavel Solansky,
    • Allen Mamerto,
    • Tatsuya Nobori,
    • Joseph R. Ecker,
    • Eric Lam,
    • Todd P. Michael,
    • and Marja C.P. Timmermans
    Genome Res. July 2024 34: 1106-1120; Published in Advance July 1, 2024, doi:10.1101/gr.279091.124
    OPEN ACCESS ARTICLE
  2. Research: Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control
    • Todd P. Michael,
    • Evan Ernst,
    • Nolan Hartwick,
    • Philomena Chu,
    • Douglas Bryant,
    • Sarah Gilbert,
    • Stefan Ortleb,
    • Erin L. Baggs,
    • K. Sowjanya Sree,
    • Klaus J. Appenroth,
    • Joerg Fuchs,
    • Florian Jupe,
    • Justin P. Sandoval,
    • Ksenia V. Krasileva,
    • Ljudmylla Borisjuk,
    • Todd C. Mockler,
    • Joseph R. Ecker,
    • Robert A. Martienssen,
    • and Eric Lam
    Genome Res. February 2021 31: 225-238; Published in Advance December 23, 2020, doi:10.1101/gr.266429.120
    OPEN ACCESS ARTICLE
  3. Research: Genome-wide DNA methylation patterns in LSH mutant reveals de-repression of repeat elements and redundant epigenetic silencing pathways
    • Weishi Yu,
    • Carl McIntosh,
    • Ryan Lister,
    • Iris Zhu,
    • Yixing Han,
    • Jianke Ren,
    • David Landsman,
    • Eunice Lee,
    • Victorino Briones,
    • Minoru Terashima,
    • Robert Leighty,
    • Joseph R. Ecker,
    • and Kathrin Muegge
    Genome Res. October 2014 24: 1613-1623; Published in Advance August 28, 2014, doi:10.1101/gr.172015.114
  4. Research: Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells
    • Timothy J. Looney,
    • Li Zhang,
    • Chih-Hsin Chen,
    • Jae Hyun Lee,
    • Sheila Chari,
    • Frank Fuxiang Mao,
    • Mattia Pelizzola,
    • Lu Zhang,
    • Ryan Lister,
    • Samuel W. Baker,
    • Croydon J. Fernandes,
    • Jedidiah Gaetz,
    • Kara M. Foshay,
    • Kayla L. Clift,
    • Zhenyu Zhang,
    • Wei-Qiang Li,
    • Eric J. Vallender,
    • Ulrich Wagner,
    • Jane Yuxia Qin,
    • Katelyn J. Michelini,
    • Branimir Bugarija,
    • Donghyun Park,
    • Emmanuel Aryee,
    • Thomas Stricker,
    • Jie Zhou,
    • Kevin P. White,
    • Bing Ren,
    • Gary P. Schroth,
    • Joseph R. Ecker,
    • Andy Peng Xiang,
    • and Bruce T. Lahn
    Genome Res. February 2014 24: 267-280; Published in Advance December 5, 2013, doi:10.1101/gr.143891.112
  5. Research: Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population
    • Robert J. Schmitz,
    • Yupeng He,
    • Oswaldo Valdés-López,
    • Saad M. Khan,
    • Trupti Joshi,
    • Mark A. Urich,
    • Joseph R. Nery,
    • Brian Diers,
    • Dong Xu,
    • Gary Stacey,
    • and Joseph R. Ecker
    Genome Res. October 2013 23: 1663-1674; Published in Advance June 5, 2013, doi:10.1101/gr.152538.112
  6. Research: Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
    • Gary C. Hon,
    • R. David Hawkins,
    • Otavia L. Caballero,
    • Christine Lo,
    • Ryan Lister,
    • Mattia Pelizzola,
    • Armand Valsesia,
    • Zhen Ye,
    • Samantha Kuan,
    • Lee E. Edsall,
    • Anamaria Aranha Camargo,
    • Brian J. Stevenson,
    • Joseph R. Ecker,
    • Vineet Bafna,
    • Robert L. Strausberg,
    • Andrew J. Simpson,
    • and Bing Ren
    Genome Res. February 2012 22: 246-258; Published in Advance December 7, 2011, doi:10.1101/gr.125872.111
  7. Next-Generation DNA Sequencing/Review: Finding the fifth base: Genome-wide sequencing of cytosine methylation
    • Ryan Lister and
    • Joseph R. Ecker
    Genome Res. June 2009 19: 959-966; Published in Advance March 9, 2009, doi:10.1101/gr.083451.108
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