Searching journal content for John S. Mattick in author.

Displaying results 1-10 of 16
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  1. Research: Widespread formation of double-stranded RNAs in testis
    • Andreas Werner,
    • James E. Clark,
    • Calum Samaranayake,
    • John Casement,
    • Hany S. Zinad,
    • Shaymaa Sadeq,
    • Surar Al-Hashimi,
    • Martin Smith,
    • Noora Kotaja,
    • and John S. Mattick
    Genome Res. July 2021 31: 1174-1186; Published in Advance June 22, 2021, doi:10.1101/gr.265603.120
  2. Resource: Improved definition of the mouse transcriptome via targeted RNA sequencing
    • Giovanni Bussotti,
    • Tommaso Leonardi,
    • Michael B. Clark,
    • Tim R. Mercer,
    • Joanna Crawford,
    • Lorenzo Malquori,
    • Cedric Notredame,
    • Marcel E. Dinger,
    • John S. Mattick,
    • and Anton J. Enright
    Genome Res. May 2016 26: 705-716; doi:10.1101/gr.199760.115
    OPEN ACCESS ARTICLE
  3. Resource: Genome-wide discovery of human splicing branchpoints
    • Tim R. Mercer,
    • Michael B. Clark,
    • Stacey B. Andersen,
    • Marion E. Brunck,
    • Wilfried Haerty,
    • Joanna Crawford,
    • Ryan J. Taft,
    • Lars K. Nielsen,
    • Marcel E. Dinger,
    • and John S. Mattick
    Genome Res. February 2015 25: 290-303; Published in Advance January 5, 2015, doi:10.1101/gr.182899.114
  4. Perspective: Understanding the regulatory and transcriptional complexity of the genome through structure
    • Tim R. Mercer and
    • John S. Mattick
    Genome Res. July 2013 23: 1081-1088; doi:10.1101/gr.156612.113
  5. Resource: Triplexator: Detecting nucleic acid triple helices in genomic and transcriptomic data
    • Fabian A. Buske,
    • Denis C. Bauer,
    • John S. Mattick,
    • and Timothy L. Bailey
    Genome Res. July 2012 22: 1372-1381; Published in Advance May 1, 2012, doi:10.1101/gr.130237.111
  6. Research: Genome-wide analysis of long noncoding RNA stability
    • Michael B. Clark,
    • Rebecca L. Johnston,
    • Mario Inostroza-Ponta,
    • Archa H. Fox,
    • Ellen Fortini,
    • Pablo Moscato,
    • Marcel E. Dinger,
    • and John S. Mattick
    Genome Res. May 2012 22: 885-898; Published in Advance March 9, 2012, doi:10.1101/gr.131037.111
  7. Research: Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome
    • Tim R. Mercer,
    • Marcel E. Dinger,
    • Cameron P. Bracken,
    • Gabriel Kolle,
    • Jan M. Szubert,
    • Darren J. Korbie,
    • Marjan E. Askarian-Amiri,
    • Brooke B. Gardiner,
    • Gregory J. Goodall,
    • Sean M. Grimmond,
    • and John S. Mattick
    Genome Res. December 2010 20: 1639-1650; Published in Advance November 2, 2010, doi:10.1101/gr.112128.110
  8. Methods: Cross-mapping and the identification of editing sites in mature microRNAs in high-throughput sequencing libraries
    • Michiel J.L. de Hoon,
    • Ryan J. Taft,
    • Takehiro Hashimoto,
    • Mutsumi Kanamori-Katayama,
    • Hideya Kawaji,
    • Mitsuoki Kawano,
    • Mami Kishima,
    • Timo Lassmann,
    • Geoffrey J. Faulkner,
    • John S. Mattick,
    • Carsten O. Daub,
    • Piero Carninci,
    • Jun Kawai,
    • Harukazu Suzuki,
    • and Yoshihide Hayashizaki
    Genome Res. February 2010 20: 257-264; Published in Advance January 5, 2010, doi:10.1101/gr.095273.109
    OPEN ACCESS ARTICLE
  9. Article: MEN ε/β nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles
    • Hongjae Sunwoo,
    • Marcel E. Dinger,
    • Jeremy E. Wilusz,
    • Paulo P. Amaral,
    • John S. Mattick,
    • and David L. Spector
    Genome Res. March 2009 19: 347-359; Published in Advance December 22, 2008, doi:10.1101/gr.087775.108
  10. LETTER: Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation
    • Marcel E. Dinger,
    • Paulo P. Amaral,
    • Tim R. Mercer,
    • Ken C. Pang,
    • Stephen J. Bruce,
    • Brooke B. Gardiner,
    • Marjan E. Askarian-Amiri,
    • Kelin Ru,
    • Giulia Soldà,
    • Cas Simons,
    • Susan M. Sunkin,
    • Mark L. Crowe,
    • Sean M. Grimmond,
    • Andrew C. Perkins,
    • and John S. Mattick
    Genome Res. September 2008 18: 1433-1445; Published in Advance June 18, 2008, doi:10.1101/gr.078378.108
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