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John C. Marioni
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Displaying results 1-7 of
7
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Research
:
Assessing the reliability of spike-in normalization for analyses of single-cell RNA sequencing data
Aaron T.L. Lun
,
Fernando J. Calero-Nieto
,
Liora Haim-Vilmovsky
,
Berthold Göttgens
,
and
John C. Marioni
Genome Res.
November 2017
27
:
1795
-
1806
;
Published in Advance
October 13, 2017
,
doi:
10.1101/gr.222877.117
Abstract
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Research
:
High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA–tRNA interface
Bianca M. Schmitt
,
Konrad L.M. Rudolph
,
Panagiota Karagianni
,
Nuno A. Fonseca
,
Robert J. White
,
Iannis Talianidis
,
Duncan T. Odom
,
John C. Marioni
,
and
Claudia Kutter
Genome Res.
November 2014
24
:
1797
-
1807
;
Published in Advance
August 13, 2014
,
doi:
10.1101/gr.176784.114
Abstract
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Research
:
Extensive compensatory
cis-trans
regulation in the evolution of mouse gene expression
Angela Goncalves
,
Sarah Leigh-Brown
,
David Thybert
,
Klara Stefflova
,
Ernest Turro
,
Paul Flicek
,
Alvis Brazma
,
Duncan T. Odom
,
and
John C. Marioni
Genome Res.
December 2012
22
:
2376
-
2384
;
Published in Advance
August 23, 2012
,
doi:
10.1101/gr.142281.112
Abstract
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Research
:
Comparative RNA sequencing reveals substantial genetic variation in endangered primates
George H. Perry
,
Páll Melsted
,
John C. Marioni
,
Ying Wang
,
Russell Bainer
,
Joseph K. Pickrell
,
Katelyn Michelini
,
Sarah Zehr
,
Anne D. Yoder
,
Matthew Stephens
,
Jonathan K. Pritchard
,
and
Yoav Gilad
Genome Res.
April 2012
22
:
602
-
610
;
Published in Advance
December 29, 2011
,
doi:
10.1101/gr.130468.111
Abstract
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Letter
:
Sex-specific and lineage-specific alternative splicing in primates
Ran Blekhman
,
John C. Marioni
,
Paul Zumbo
,
Matthew Stephens
,
and
Yoav Gilad
Genome Res.
February 2010
20
:
180
-
189
;
Published in Advance
December 15, 2009
,
doi:
10.1101/gr.099226.109
Abstract
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Methods
:
RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
John C. Marioni
,
Christopher E. Mason
,
Shrikant M. Mane
,
Matthew Stephens
,
and
Yoav Gilad
Genome Res.
September 2008
18
:
1509
-
1517
;
Published in Advance
June 11, 2008
,
doi:
10.1101/gr.079558.108
Abstract
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RESOURCE
:
An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
Vardhman K. Rakyan
,
Thomas A. Down
,
Natalie P. Thorne
,
Paul Flicek
,
Eugene Kulesha
,
Stefan Gräf
,
Eleni M. Tomazou
,
Liselotte Bäckdahl
,
Nathan Johnson
,
Marlis Herberth
,
Kevin L. Howe
,
David K. Jackson
,
Marcos M. Miretti
,
Heike Fiegler
,
John C. Marioni
,
Ewan Birney
,
Tim J.P. Hubbard
,
Nigel P. Carter
,
Simon Tavaré
,
and
Stephan Beck
Genome Res.
September 2008
18
:
1518
-
1529
;
Published in Advance
June 24, 2008
,
doi:
10.1101/gr.077479.108
Abstract
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