Searching journal content for Jing-Dong J. Han in author.

Displaying results 1-10 of 11
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  1. Research: The strand-biased mitochondrial DNA methylome and its regulation by DNMT3A
    • Xiaoyang Dou,
    • Jerome D. Boyd-Kirkup,
    • Joseph McDermott,
    • Xiaoli Zhang,
    • Fang Li,
    • Bowen Rong,
    • Rui Zhang,
    • Bisi Miao,
    • Peilin Chen,
    • Hao Cheng,
    • Jianhuang Xue,
    • David Bennett,
    • Jiemin Wong,
    • Fei Lan,
    • and Jing-Dong J. Han
    Genome Res. October 2019 29: 1622-1634; Published in Advance September 19, 2019, doi:10.1101/gr.234021.117
    OPEN ACCESS ARTICLE
  2. Research: Widespread roles of enhancer-like transposable elements in cell identity and long-range genomic interactions
    • Yaqiang Cao,
    • Guoyu Chen,
    • Gang Wu,
    • Xiaoli Zhang,
    • Joseph McDermott,
    • Xingwei Chen,
    • Chi Xu,
    • Quanlong Jiang,
    • Zhaoxiong Chen,
    • Yingying Zeng,
    • Daosheng Ai,
    • Yi Huang,
    • and Jing-Dong J. Han
    Genome Res. January 2019 29: 40-52; Published in Advance November 19, 2018, doi:10.1101/gr.235747.118
    OPEN ACCESS ARTICLE
  3. Research: Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos
    • Denghui Liu,
    • Xinyi Wang,
    • Dajian He,
    • Chunli Sun,
    • Xiechao He,
    • Lanzhen Yan,
    • Yizhou Li,
    • Jing-Dong J. Han,
    • and Ping Zheng
    Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117
  4. Corrigendum: Corrigendum: Transcriptome analyses of rhesus monkey preimplantation embryos reveal a reduced capacity for DNA double-strand break repair in primate oocytes and early embryos
    • Xinyi Wang,
    • Denghui Liu,
    • Dajian He,
    • Shengbao Suo,
    • Xian Xia,
    • Xiechao He,
    • Jing-Dong J. Han,
    • and Ping Zheng
    Genome Res. September 2017 27: 1621.2; doi:10.1101/gr.226613.117
    OPEN ACCESS ARTICLE
  5. Research: Transcriptome analyses of rhesus monkey preimplantation embryos reveal a reduced capacity for DNA double-strand break repair in primate oocytes and early embryos
    • Xinyi Wang,
    • Denghui Liu,
    • Dajian He,
    • Shengbao Suo,
    • Xian Xia,
    • Xiechao He,
    • Jing-Dong J. Han,
    • and Ping Zheng
    Genome Res. April 2017 27: 567-579; Published in Advance February 21, 2017, doi:10.1101/gr.198044.115
  6. Method: Single-cell-level spatial gene expression in the embryonic neural differentiation niche
    • Yi Huang,
    • Xiaoming Yu,
    • Na Sun,
    • Nan Qiao,
    • Yaqiang Cao,
    • Jerome D. Boyd-Kirkup,
    • Qin Shen,
    • and Jing-Dong J. Han
    Genome Res. April 2015 25: 570-581; Published in Advance January 9, 2015, doi:10.1101/gr.181966.114
  7. Letter: Genome-wide mapping of SMAD target genes reveals the role of BMP signaling in embryonic stem cell fate determination
    • Teng Fei,
    • Kai Xia,
    • Zhongwei Li,
    • Bing Zhou,
    • Shanshan Zhu,
    • Hua Chen,
    • Jianping Zhang,
    • Zhang Chen,
    • Huasheng Xiao,
    • Jing-Dong J. Han,
    • and Ye-Guang Chen
    Genome Res. January 2010 20: 36-44; Published in Advance November 19, 2009, doi:10.1101/gr.092114.109
  8. LETTER: Impacts of protein–protein interaction domains on organism and network complexity
    • Kai Xia,
    • Zheng Fu,
    • Lei Hou,
    • and Jing-Dong J. Han
    Genome Res. September 2008 18: 1500-1508; Published in Advance August 7, 2008, doi:10.1101/gr.068130.107
  9. LETTER: Revisiting the Saccharomyces cerevisiae predicted ORFeome
    • Qian-Ru Li,
    • Anne-Ruxandra Carvunis,
    • Haiyuan Yu,
    • Jing-Dong J. Han,
    • Quan Zhong,
    • Nicolas Simonis,
    • Stanley Tam,
    • Tong Hao,
    • Niels J. Klitgord,
    • Denis Dupuy,
    • Danny Mou,
    • Ilan Wapinski,
    • Aviv Regev,
    • David E. Hill,
    • Michael E. Cusick,
    • and Marc Vidal
    Genome Res. August 2008 18: 1294-1303; Published in Advance May 23, 2008, doi:10.1101/gr.076661.108
  10. Methods: Inferring causal relationships among different histone modifications and gene expression
    • Hong Yu,
    • Shanshan Zhu,
    • Bing Zhou,
    • Huiling Xue,
    • and Jing-Dong J. Han
    Genome Res. August 2008 18: 1314-1324; Published in Advance June 18, 2008, doi:10.1101/gr.073080.107
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