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Jin Billy Li
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16
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Research
:
Epigenetic drift score captures directional methylation variability and links aging to transcriptional, metabolic, and genetic alterations
Xiu Fan
,
Qili Qian
,
Wenran Li
,
Tianzi Liu
,
Changqing Zeng
,
Peilin Jia
,
Huandong Lin
,
Xin Gao
,
Li Jin
,
Mingfeng Xia
,
Sijia Wang
,
and
Fan Liu
Genome Res.
October 2025
35
:
2173
-
2188
;
Published in Advance
August 1, 2025
,
doi:
10.1101/gr.280155.124
Abstract
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Research
:
Chromatin interaction maps identify oncogenic targets of enhancer duplications in cancer
Yueqiang Song
,
Fuyuan Li
,
Shangzi Wang
,
Yuntong Wang
,
Cong Lai
,
Lian Chen
,
Ning Jiang
,
Jin Li
,
Xingdong Chen
,
Swneke D. Bailey
,
and
Xiaoyang Zhang
Genome Res.
October 2024
34
:
1514
-
1527
;
Published in Advance
October 18, 2024
,
doi:
10.1101/gr.278418.123
Abstract
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Resource
:
Proactive functional classification of all possible missense single-nucleotide variants in
KCNQ4
Honglan Zheng
,
Xinhao Yan
,
Guanluan Li
,
Hengwei Lin
,
Siqi Deng
,
Wenhui Zhuang
,
Fuqiang Yao
,
Yu Lu
,
Xin Xia
,
Huijun Yuan
,
Li Jin
,
and
Zhiqiang Yan
Genome Res.
August 2022
32
:
1573
-
1584
;
Published in Advance
June 27, 2022
,
doi:
10.1101/gr.276562.122
Abstract
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Method
:
Guide Positioning Sequencing identifies aberrant DNA methylation patterns that alter cell identity and tumor-immune surveillance networks
Jin Li
,
Yan Li
,
Wei Li
,
Huaibing Luo
,
Yanping Xi
,
Shihua Dong
,
Ming Gao
,
Peng Xu
,
Baolong Zhang
,
Ying Liang
,
Qingping Zou
,
Xin Hu
,
Lina Peng
,
Dan Zou
,
Ting Wang
,
Hongbo Yang
,
Cizhong Jiang
,
Shaoliang Peng
,
Feizhen Wu
,
and
Wenqiang Yu
Genome Res.
February 2019
29
:
270
-
280
;
Published in Advance
January 22, 2019
,
doi:
10.1101/gr.240606.118
Abstract
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Method
:
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
Ashis Saha
,
Yungil Kim
,
Ariel D.H. Gewirtz
,
Brian Jo
,
Chuan Gao
,
Ian C. McDowell
,
The GTEx Consortium
,
Barbara E. Engelhardt
,
and
Alexis Battle
Genome Res.
November 2017
27
:
1843
-
1858
;
Published in Advance
October 11, 2017
,
doi:
10.1101/gr.216721.116
Abstract
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Method
:
Identifying
cis
-mediators for
trans
-eQTLs across many human tissues using genomic mediation analysis
Fan Yang
,
Jiebiao Wang
,
The GTEx Consortium
,
Brandon L. Pierce
,
and
Lin S. Chen
Genome Res.
November 2017
27
:
1859
-
1871
;
Published in Advance
October 11, 2017
,
doi:
10.1101/gr.216754.116
Abstract
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Method
:
A probabilistic method for testing and estimating selection differences between populations
Yungang He
,
Minxian Wang
,
Xin Huang
,
Ran Li
,
Hongyang Xu
,
Shuhua Xu
,
and
Li Jin
Genome Res.
December 2015
25
:
1903
-
1909
;
Published in Advance
October 13, 2015
,
doi:
10.1101/gr.192336.115
Abstract
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Research
:
The landscape of genomic imprinting across diverse adult human tissues
Yael Baran
,
Meena Subramaniam
,
Anne Biton
,
Taru Tukiainen
,
Emily K. Tsang
,
Manuel A. Rivas
,
Matti Pirinen
,
Maria Gutierrez-Arcelus
,
Kevin S. Smith
,
Kim R. Kukurba
,
Rui Zhang
,
Celeste Eng
,
Dara G. Torgerson
,
Cydney Urbanek
,
the GTEx Consortium
,
Jin Billy Li
,
Jose R. Rodriguez-Santana
,
Esteban G. Burchard
,
Max A. Seibold
,
Daniel G. MacArthur
,
Stephen B. Montgomery
,
Noah A. Zaitlen
,
and
Tuuli Lappalainen
Genome Res.
July 2015
25
:
927
-
936
;
Published in Advance
May 7, 2015
,
doi:
10.1101/gr.192278.115
Abstract
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Research
:
A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes
Lily Bazak
,
Ami Haviv
,
Michal Barak
,
Jasmine Jacob-Hirsch
,
Patricia Deng
,
Rui Zhang
,
Farren J. Isaacs
,
Gideon Rechavi
,
Jin Billy Li
,
Eli Eisenberg
,
and
Erez Y. Levanon
Genome Res.
March 2014
24
:
365
-
376
;
Published in Advance
December 17, 2013
,
doi:
10.1101/gr.164749.113
Abstract
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Resource
:
RNA sequencing reveals a diverse and dynamic repertoire of the
Xenopus tropicalis
transcriptome over development
Meng How Tan
,
Kin Fai Au
,
Arielle L. Yablonovitch
,
Andrea E. Wills
,
Jason Chuang
,
Julie C. Baker
,
Wing Hung Wong
,
and
Jin Billy Li
Genome Res.
January 2013
23
:
201
-
216
;
Published in Advance
September 7, 2012
,
doi:
10.1101/gr.141424.112
Abstract
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