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Jiarui Ding
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Method
:
TITAN: inference of copy number architectures in clonal cell populations from tumor whole-genome sequence data
Gavin Ha
,
Andrew Roth
,
Jaswinder Khattra
,
Julie Ho
,
Damian Yap
,
Leah M. Prentice
,
Nataliya Melnyk
,
Andrew McPherson
,
Ali Bashashati
,
Emma Laks
,
Justina Biele
,
Jiarui Ding
,
Alan Le
,
Jamie Rosner
,
Karey Shumansky
,
Marco A. Marra
,
C. Blake Gilks
,
David G. Huntsman
,
Jessica N. McAlpine
,
Samuel Aparicio
,
and
Sohrab P. Shah
Genome Res.
November 2014
24
:
1881
-
1893
;
Published in Advance
July 24, 2014
,
doi:
10.1101/gr.180281.114
Abstract
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Method
:
Integrative analysis of genome-wide loss of heterozygosity and monoallelic expression at nucleotide resolution reveals disrupted pathways in triple-negative breast cancer
Gavin Ha
,
Andrew Roth
,
Daniel Lai
,
Ali Bashashati
,
Jiarui Ding
,
Rodrigo Goya
,
Ryan Giuliany
,
Jamie Rosner
,
Arusha Oloumi
,
Karey Shumansky
,
Suet-Feung Chin
,
Gulisa Turashvili
,
Martin Hirst
,
Carlos Caldas
,
Marco A. Marra
,
Samuel Aparicio
,
and
Sohrab P. Shah
Genome Res.
October 2012
22
:
1995
-
2007
;
Published in Advance
May 25, 2012
,
doi:
10.1101/gr.137570.112
Abstract
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