Searching journal content for Jay Shendure in author.

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  1. Method: Multicondition and multimodal temporal profile inference during mouse embryonic development
    • Ran Zhang,
    • Chengxiang Qiu,
    • Galina N. Filippova,
    • Gang Li,
    • Jay Shendure,
    • Jean-Philippe Vert,
    • Xinxian Deng,
    • William Stafford Noble,
    • and Christine M. Disteche
    Genome Res. October 2025 35: 2339-2351; Published in Advance August 14, 2025, doi:10.1101/gr.279997.124
    OPEN ACCESS ARTICLE
  2. Resource: Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes
    • Timothy J. Durham,
    • Riza M. Daza,
    • Louis Gevirtzman,
    • Darren A. Cusanovich,
    • Olubusayo Bolonduro,
    • William Stafford Noble,
    • Jay Shendure,
    • and Robert H. Waterston
    Genome Res. October 2021 31: 1952-1969; Published in Advance April 22, 2021, doi:10.1101/gr.271791.120
    OPEN ACCESS ARTICLE
  3. Research: Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands
    • Brian S. Roberts,
    • E. Christopher Partridge,
    • Bryan A. Moyers,
    • Vikram Agarwal,
    • Kimberly M. Newberry,
    • Beth K. Martin,
    • Jay Shendure,
    • Richard M. Myers,
    • and Gregory M. Cooper
    Genome Res. May 2021 31: 866-876; Published in Advance April 20, 2021, doi:10.1101/gr.270751.120
  4. Research: Suppressor mutations in Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology
    • Adebola Enikanolaiye,
    • Julie Ruston,
    • Rong Zeng,
    • Christine Taylor,
    • Marijke Schrock,
    • Christie M. Buchovecky,
    • Jay Shendure,
    • Elif Acar,
    • and Monica J. Justice
    Genome Res. April 2020 30: 540-552; Published in Advance April 21, 2020, doi:10.1101/gr.258400.119
    OPEN ACCESS ARTICLE
  5. Corrigendum: Corrigendum: A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
    • Fumitaka Inoue,
    • Martin Kircher,
    • Beth Martin,
    • Gregory M. Cooper,
    • Daniela M. Witten,
    • Michael T. McManus,
    • Nadav Ahituv,
    • and Jay Shendure
    Genome Res. May 2018 28: 766.3; doi:10.1101/gr.237321.118
    OPEN ACCESS ARTICLE
  6. Research: A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
    • Fumitaka Inoue,
    • Martin Kircher,
    • Beth Martin,
    • Gregory M. Cooper,
    • Daniela M. Witten,
    • Michael T. McManus,
    • Nadav Ahituv,
    • and Jay Shendure
    Genome Res. January 2017 27: 38-52; Published in Advance November 9, 2016, doi:10.1101/gr.212092.116
  7. Corrigendum: Corrigendum: MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals
    • Keisha D. Carlson,
    • Peter H. Sudmant,
    • Maximilian O. Press,
    • Evan E. Eichler,
    • Jay Shendure,
    • and Christine Queitsch
    Genome Res. August 2015 25: 1244
    OPEN ACCESS ARTICLE
  8. Research: Exome sequencing reveals pathogenic mutations in 91 strains of mice with Mendelian disorders
    • Heather Fairfield,
    • Anuj Srivastava,
    • Guruprasad Ananda,
    • Rangjiao Liu,
    • Martin Kircher,
    • Anuradha Lakshminarayana,
    • Belinda S. Harris,
    • Son Yong Karst,
    • Louise A. Dionne,
    • Coleen C. Kane,
    • Michelle Curtain,
    • Melissa L. Berry,
    • Patricia F. Ward-Bailey,
    • Ian Greenstein,
    • Candice Byers,
    • Anne Czechanski,
    • Jocelyn Sharp,
    • Kristina Palmer,
    • Polyxeni Gudis,
    • Whitney Martin,
    • Abby Tadenev,
    • Laurent Bogdanik,
    • C. Herbert Pratt,
    • Bo Chang,
    • David G. Schroeder,
    • Gregory A. Cox,
    • Paul Cliften,
    • Jeffrey Milbrandt,
    • Stephen Murray,
    • Robert Burgess,
    • David E. Bergstrom,
    • Leah Rae Donahue,
    • Hanan Hamamy,
    • Amira Masri,
    • Federico A. Santoni,
    • Periklis Makrythanasis,
    • Stylianos E. Antonarakis,
    • Jay Shendure,
    • and Laura G. Reinholdt
    Genome Res. July 2015 25: 948-957; Published in Advance April 27, 2015, doi:10.1101/gr.186882.114
  9. Method: MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals
    • Keisha D. Carlson,
    • Peter H. Sudmant,
    • Maximilian O. Press,
    • Evan E. Eichler,
    • Jay Shendure,
    • and Christine Queitsch
    Genome Res. May 2015 25: 750-761; Published in Advance February 6, 2015, doi:10.1101/gr.182212.114
  10. Research: Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains
    • Stephen J. Salipante,
    • David J. Roach,
    • Jacob O. Kitzman,
    • Matthew W. Snyder,
    • Bethany Stackhouse,
    • Susan M. Butler-Wu,
    • Choli Lee,
    • Brad T. Cookson,
    • and Jay Shendure
    Genome Res. January 2015 25: 119-128; Published in Advance November 4, 2014, doi:10.1101/gr.180190.114
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