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Jan O. Korbel
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15
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:
The impact of long-read sequencing on human population-scale genomics
Tobias Rausch
,
Tobias Marschall
,
and
Jan O. Korbel
Genome Res.
April 2025
35
:
593
-
598
;
doi:
10.1101/gr.280120.124
Abstract
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:
An integrative TAD catalog in lymphoblastoid cell lines discloses the functional impact of deletions and insertions in human genomes
Chong Li
,
Marc Jan Bonder
,
Sabriya Syed
,
Matthew Jensen
,
Human Genome Structural Variation Consortium (HGSVC)
,
HGSVC Functional Analysis Working Group
,
Mark B. Gerstein
,
Michael C. Zody
,
Mark J.P. Chaisson
,
Michael E. Talkowski
,
Tobias Marschall
,
Jan O. Korbel
,
Evan E. Eichler
,
Charles Lee
,
and
Xinghua Shi
Genome Res.
December 2024
34
:
2304
-
2318
;
Published in Advance
December 5, 2024
,
doi:
10.1101/gr.279419.124
Abstract
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:
Gaps and complex structurally variant loci in phased genome assemblies
David Porubsky
,
Mitchell R. Vollger
,
William T. Harvey
,
Allison N. Rozanski
,
Peter Ebert
,
Glenn Hickey
,
Patrick Hasenfeld
,
Ashley D. Sanders
,
Catherine Stober
,
Human Pangenome Reference Consortium
,
Jan O. Korbel
,
Benedict Paten
,
Tobias Marschall
,
and
Evan E. Eichler
Genome Res.
April 2023
33
:
496
-
510
;
Published in Advance
May 10, 2023
,
doi:
10.1101/gr.277334.122
Abstract
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:
A high-resolution map of small-scale inversions in the gibbon genome
Ludovica Mercuri
,
Donato Palmisano
,
Alberto L'Abbate
,
Pietro D'Addabbo
,
Francesco Montinaro
,
Claudia Rita Catacchio
,
Patrick Hasenfeld
,
Mario Ventura
,
Jan O. Korbel
,
Ashley D. Sanders
,
Flavia Angela Maria Maggiolini
,
and
Francesca Antonacci
Genome Res.
October 2022
32
:
1941
-
1951
;
Published in Advance
September 30, 2022
,
doi:
10.1101/gr.276960.122
Abstract
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:
Somatic structural variant formation is guided by and influences genome architecture
Nikos Sidiropoulos
,
Balca R. Mardin
,
F. Germán Rodríguez-González
,
Ivan D. Bochkov
,
Shilpa Garg
,
Adrian M. Stütz
,
Jan O. Korbel
,
Erez Lieberman Aiden
,
and
Joachim Weischenfeldt
Genome Res.
April 2022
32
:
643
-
655
;
Published in Advance
February 17, 2022
,
doi:
10.1101/gr.275790.121
Abstract
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:
Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution
Flavia Angela Maria Maggiolini
,
Ashley D. Sanders
,
Colin James Shew
,
Arvis Sulovari
,
Yafei Mao
,
Marta Puig
,
Claudia Rita Catacchio
,
Maria Dellino
,
Donato Palmisano
,
Ludovica Mercuri
,
Miriana Bitonto
,
David Porubský
,
Mario Cáceres
,
Evan E. Eichler
,
Mario Ventura
,
Megan Y. Dennis
,
Jan O. Korbel
,
and
Francesca Antonacci
Genome Res.
November 2020
30
:
1680
-
1693
;
Published in Advance
October 22, 2020
,
doi:
10.1101/gr.265322.120
Abstract
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Research
:
Pan-cancer analysis distinguishes transcriptional changes of aneuploidy from proliferation
Christopher Buccitelli
,
Lorena Salgueiro
,
Konstantina Rowald
,
Rocio Sotillo
,
Balca R. Mardin
,
and
Jan O. Korbel
Genome Res.
April 2017
27
:
501
-
511
;
Published in Advance
March 20, 2017
,
doi:
10.1101/gr.212225.116
Abstract
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Resource
:
Natural variation in genome architecture among 205
Drosophila melanogaster
Genetic Reference Panel lines
Wen Huang
,
Andreas Massouras
,
Yutaka Inoue
,
Jason Peiffer
,
Miquel Ràmia
,
Aaron M. Tarone
,
Lavanya Turlapati
,
Thomas Zichner
,
Dianhui Zhu
,
Richard F. Lyman
,
Michael M. Magwire
,
Kerstin Blankenburg
,
Mary Anna Carbone
,
Kyle Chang
,
Lisa L. Ellis
,
Sonia Fernandez
,
Yi Han
,
Gareth Highnam
,
Carl E. Hjelmen
,
John R. Jack
,
Mehwish Javaid
,
Joy Jayaseelan
,
Divya Kalra
,
Sandy Lee
,
Lora Lewis
,
Mala Munidasa
,
Fiona Ongeri
,
Shohba Patel
,
Lora Perales
,
Agapito Perez
,
LingLing Pu
,
Stephanie M. Rollmann
,
Robert Ruth
,
Nehad Saada
,
Crystal Warner
,
Aneisa Williams
,
Yuan-Qing Wu
,
Akihiko Yamamoto
,
Yiqing Zhang
,
Yiming Zhu
,
Robert R.H. Anholt
,
Jan O. Korbel
,
David Mittelman
,
Donna M. Muzny
,
Richard A. Gibbs
,
Antonio Barbadilla
,
J. Spencer Johnston
,
Eric A. Stone
,
Stephen Richards
,
Bart Deplancke
,
and
Trudy F.C. Mackay
Genome Res.
July 2014
24
:
1193
-
1208
;
Published in Advance
April 8, 2014
,
doi:
10.1101/gr.171546.113
Abstract
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Resource
:
Impact of genomic structural variation in
Drosophila melanogaster
based on population-scale sequencing
Thomas Zichner
,
David A. Garfield
,
Tobias Rausch
,
Adrian M. Stütz
,
Enrico Cannavó
,
Martina Braun
,
Eileen E.M. Furlong
,
and
Jan O. Korbel
Genome Res.
March 2013
23
:
568
-
579
;
Published in Advance
December 6, 2012
,
doi:
10.1101/gr.142646.112
Abstract
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:
Relating CNVs to transcriptome data at fine resolution: Assessment of the effect of variant size, type, and overlap with functional regions
Andreas Schlattl
,
Simon Anders
,
Sebastian M. Waszak
,
Wolfgang Huber
,
and
Jan O. Korbel
Genome Res.
December 2011
21
:
2004
-
2013
;
Published in Advance
August 23, 2011
,
doi:
10.1101/gr.122614.111
Abstract
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Single-cell gene signature scoring
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