Searching journal content for Jakob S. Pedersen in author.

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  1. Research: Deficiency of nucleotide excision repair is associated with mutational signature observed in cancer
    • Myrthe Jager,
    • Francis Blokzijl,
    • Ewart Kuijk,
    • Johanna Bertl,
    • Maria Vougioukalaki,
    • Roel Janssen,
    • Nicolle Besselink,
    • Sander Boymans,
    • Joep de Ligt,
    • Jakob Skou Pedersen,
    • Jan Hoeijmakers,
    • Joris Pothof,
    • Ruben van Boxtel,
    • and Edwin Cuppen
    Genome Res. July 2019 29: 1067-1077; Published in Advance June 20, 2019, doi:10.1101/gr.246223.118
    OPEN ACCESS ARTICLE
  2. Method: Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome
    • Jakob Skou Pedersen,
    • Eivind Valen,
    • Amhed M. Vargas Velazquez,
    • Brian J. Parker,
    • Morten Rasmussen,
    • Stinus Lindgreen,
    • Berit Lilje,
    • Desmond J. Tobin,
    • Theresa K. Kelly,
    • Søren Vang,
    • Robin Andersson,
    • Peter A. Jones,
    • Cindi A. Hoover,
    • Alexei Tikhonov,
    • Egor Prokhortchouk,
    • Edward M. Rubin,
    • Albin Sandelin,
    • M. Thomas P. Gilbert,
    • Anders Krogh,
    • Eske Willerslev,
    • and Ludovic Orlando
    Genome Res. March 2014 24: 454-466; Published in Advance December 3, 2013, doi:10.1101/gr.163592.113
    OPEN ACCESS ARTICLE
  3. Method: Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes
    • Michael F. Lin,
    • Pouya Kheradpour,
    • Stefan Washietl,
    • Brian J. Parker,
    • Jakob S. Pedersen,
    • and Manolis Kellis
    Genome Res. November 2011 21: 1916-1928; Published in Advance October 12, 2011, doi:10.1101/gr.108753.110
    OPEN ACCESS ARTICLE
  4. Method: New families of human regulatory RNA structures identified by comparative analysis of vertebrate genomes
    • Brian J. Parker,
    • Ida Moltke,
    • Adam Roth,
    • Stefan Washietl,
    • Jiayu Wen,
    • Manolis Kellis,
    • Ronald Breaker,
    • and Jakob Skou Pedersen
    Genome Res. November 2011 21: 1929-1943; Published in Advance October 12, 2011, doi:10.1101/gr.112516.110
  5. LETTER: Structured RNAs in the ENCODE selected regions of the human genome
    • Stefan Washietl,
    • Jakob S. Pedersen,
    • Jan O. Korbel,
    • Claudia Stocsits,
    • Andreas R. Gruber,
    • Jörg Hackermüller,
    • Jana Hertel,
    • Manja Lindemeyer,
    • Kristin Reiche,
    • Andrea Tanzer,
    • Catherine Ucla,
    • Carine Wyss,
    • Stylianos E. Antonarakis,
    • France Denoeud,
    • Julien Lagarde,
    • Jorg Drenkow,
    • Philipp Kapranov,
    • Thomas R. Gingeras,
    • Roderic Guigó,
    • Michael Snyder,
    • Mark B. Gerstein,
    • Alexandre Reymond,
    • Ivo L. Hofacker,
    • and Peter F. Stadler
    Genome Res. June 2007 17: 852-864; doi:10.1101/gr.5650707
    OPEN ACCESS ARTICLE
  6. ARTICLE: Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
    • Adam Siepel,
    • Gill Bejerano,
    • Jakob S. Pedersen,
    • Angie S. Hinrichs,
    • Minmei Hou,
    • Kate Rosenbloom,
    • Hiram Clawson,
    • John Spieth,
    • LaDeana W. Hillier,
    • Stephen Richards,
    • George M. Weinstock,
    • Richard K. Wilson,
    • Richard A. Gibbs,
    • W. James Kent,
    • Webb Miller,
    • and David Haussler
    Genome Res. August 2005 15: 1034-1050; Published in Advance July 15, 2005, doi:10.1101/gr.3715005
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