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Jacqueline Chrast
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Method
:
Combining RT-PCR-seq and RNA-seq to catalog all genic elements encoded in the human genome
Cédric Howald
,
Andrea Tanzer
,
Jacqueline Chrast
,
Felix Kokocinski
,
Thomas Derrien
,
Nathalie Walters
,
Jose M. Gonzalez
,
Adam Frankish
,
Bronwen L. Aken
,
Thibaut Hourlier
,
Jan-Hinnerk Vogel
,
Simon White
,
Stephen Searle
,
Jennifer Harrow
,
Tim J. Hubbard
,
Roderic Guigó
,
and
Alexandre Reymond
Genome Res.
September 2012
22
:
1698
-
1710
;
doi:
10.1101/gr.134478.111
Abstract
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Resource
:
GENCODE: The reference human genome annotation for The ENCODE Project
Jennifer Harrow
,
Adam Frankish
,
Jose M. Gonzalez
,
Electra Tapanari
,
Mark Diekhans
,
Felix Kokocinski
,
Bronwen L. Aken
,
Daniel Barrell
,
Amonida Zadissa
,
Stephen Searle
,
If Barnes
,
Alexandra Bignell
,
Veronika Boychenko
,
Toby Hunt
,
Mike Kay
,
Gaurab Mukherjee
,
Jeena Rajan
,
Gloria Despacio-Reyes
,
Gary Saunders
,
Charles Steward
,
Rachel Harte
,
Michael Lin
,
Cédric Howald
,
Andrea Tanzer
,
Thomas Derrien
,
Jacqueline Chrast
,
Nathalie Walters
,
Suganthi Balasubramanian
,
Baikang Pei
,
Michael Tress
,
Jose Manuel Rodriguez
,
Iakes Ezkurdia
,
Jeltje van Baren
,
Michael Brent
,
David Haussler
,
Manolis Kellis
,
Alfonso Valencia
,
Alexandre Reymond
,
Mark Gerstein
,
Roderic Guigó
,
and
Tim J. Hubbard
Genome Res.
September 2012
22
:
1760
-
1774
;
doi:
10.1101/gr.135350.111
Abstract
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Research
:
Copy number variation modifies expression time courses
Evelyne Chaignat
,
Emilie Aït Yahya-Graison
,
Charlotte N. Henrichsen
,
Jacqueline Chrast
,
Frédéric Schütz
,
Sylvain Pradervand
,
and
Alexandre Reymond
Genome Res.
January 2011
21
:
106
-
113
;
Published in Advance
November 17, 2010
,
doi:
10.1101/gr.112748.110
Abstract
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ARTICLE
:
Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions
France Denoeud
,
Philipp Kapranov
,
Catherine Ucla
,
Adam Frankish
,
Robert Castelo
,
Jorg Drenkow
,
Julien Lagarde
,
Tyler Alioto
,
Caroline Manzano
,
Jacqueline Chrast
,
Sujit Dike
,
Carine Wyss
,
Charlotte N. Henrichsen
,
Nancy Holroyd
,
Mark C. Dickson
,
Ruth Taylor
,
Zahra Hance
,
Sylvain Foissac
,
Richard M. Myers
,
Jane Rogers
,
Tim Hubbard
,
Jennifer Harrow
,
Roderic Guigó
,
Thomas R. Gingeras
,
Stylianos E. Antonarakis
,
and
Alexandre Reymond
Genome Res.
June 2007
17
:
746
-
759
;
doi:
10.1101/gr.5660607
Abstract
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