Searching journal content for J Wang in author.

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  1. Research: Mapping multitissue regulatory variants reveals a liver-centric coexpression network associated with duck egg-laying performance
    • Yang Xi,
    • Jingjing Qi,
    • Zhao Yang,
    • Yutian Zeng,
    • Huicong Zhang,
    • Qiuyu Tao,
    • Mengru Xu,
    • Anqi Huang,
    • Shenqiang Hu,
    • Chunchun Han,
    • Lili Bai,
    • Jiwei Hu,
    • Jiwen Wang,
    • Liang Li,
    • Lingzhao Fang,
    • and Hehe Liu
    Genome Res. October 2025 35: 2211-2225; Published in Advance September 10, 2025, doi:10.1101/gr.280345.124
  2. Research: Common cis-regulatory variation modifies the penetrance of pathogenic SHROOM3 variants in craniofacial microsomia
    • Hao Zhu,
    • Jiao Zhang,
    • Soumya Rao,
    • Matthew D. Durbin,
    • Ying Li,
    • Ruirui Lang,
    • Jiqiang Liu,
    • Baichuan Xiao,
    • Hailin Shan,
    • Ziqiu Meng,
    • Jinmo Wang,
    • Xiaokai Tang,
    • Zhenni Shi,
    • Liza L. Cox,
    • Shouqin Zhao,
    • Stephanie M. Ware,
    • Tiong Y. Tan,
    • Michelle de Silva,
    • Lyndon Gallacher,
    • Ting Liu,
    • Jie Mi,
    • Changqing Zeng,
    • Hou-Feng Zheng,
    • Qingguo Zhang,
    • Stylianos E. Antonarakis,
    • Timothy C. Cox,
    • and Yong-Biao Zhang
    Genome Res. May 2025 35: 1065-1079; Published in Advance April 15, 2025, doi:10.1101/gr.280047.124
  3. Research: Integrating short-read and long-read single-cell RNA sequencing for comprehensive transcriptome profiling in mouse retina
    • Meng Wang,
    • Yumei Li,
    • Jun Wang,
    • Soo Hwan Oh,
    • Yexuan Cao,
    • and Rui Chen
    Genome Res. April 2025 35: 740-754; Published in Advance March 6, 2025, doi:10.1101/gr.279167.124
  4. Method: A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data
    • Siyuan Chen,
    • Jiuming Wang,
    • Inkyung Jung,
    • Zhaowen Qiu,
    • Xin Gao,
    • and Yu Li
    Genome Res. August 2024 34: 1174-1184; Published in Advance August 13, 2024, doi:10.1101/gr.279274.124
    OPEN ACCESS ARTICLE
  5. Method: CodonBERT large language model for mRNA vaccines
    • Sizhen Li,
    • Saeed Moayedpour,
    • Ruijiang Li,
    • Michael Bailey,
    • Saleh Riahi,
    • Lorenzo Kogler-Anele,
    • Milad Miladi,
    • Jacob Miner,
    • Fabien Pertuy,
    • Dinghai Zheng,
    • Jun Wang,
    • Akshay Balsubramani,
    • Khang Tran,
    • Minnie Zacharia,
    • Monica Wu,
    • Xiaobo Gu,
    • Ryan Clinton,
    • Carla Asquith,
    • Joseph Skaleski,
    • Lianne Boeglin,
    • Sudha Chivukula,
    • Anusha Dias,
    • Tod Strugnell,
    • Fernando Ulloa Montoya,
    • Vikram Agarwal,
    • Ziv Bar-Joseph,
    • and Sven Jager
    Genome Res. July 2024 34: 1027-1035; Published in Advance July 1, 2024, doi:10.1101/gr.278870.123
  6. Resource: Haplotype-resolved 3D chromatin architecture of the hybrid pig
    • Yu Lin,
    • Jing Li,
    • Yiren Gu,
    • Long Jin,
    • Jingyi Bai,
    • Jiaman Zhang,
    • Yujie Wang,
    • Pengliang Liu,
    • Keren Long,
    • Mengnan He,
    • Diyan Li,
    • Can Liu,
    • Ziyin Han,
    • Yu Zhang,
    • Xiaokai Li,
    • Bo Zeng,
    • Lu Lu,
    • Fanli Kong,
    • Ying Sun,
    • Yongliang Fan,
    • Xun Wang,
    • Tao Wang,
    • An'an Jiang,
    • Jideng Ma,
    • Linyuan Shen,
    • Li Zhu,
    • Yanzhi Jiang,
    • Guoqing Tang,
    • Xiaolan Fan,
    • Qingyou Liu,
    • Hua Li,
    • Jinyong Wang,
    • Li Chen,
    • Liangpeng Ge,
    • Xuewei Li,
    • Qianzi Tang,
    • and Mingzhou Li
    Genome Res. February 2024 34: 310-325; Published in Advance March 13, 2024, doi:10.1101/gr.278101.123
    OPEN ACCESS ARTICLE
  7. Method: Infernape uncovers cell type–specific and spatially resolved alternative polyadenylation in the brain
    • Bowei Kang,
    • Yalan Yang,
    • Kaining Hu,
    • Xiangbin Ruan,
    • Yi-Lin Liu,
    • Pinky Lee,
    • Jasper Lee,
    • Jingshu Wang,
    • and Xiaochang Zhang
    Genome Res. October 2023 33: 1774-1787; Published in Advance October 31, 2023, doi:10.1101/gr.277864.123
    OPEN ACCESS ARTICLE
  8. Method: Diffusion-enhanced characterization of 3D chromatin structure reveals its linkage to gene regulatory networks and the interactome
    • Yueying He,
    • Yue Xue,
    • Jingyao Wang,
    • Yupeng Huang,
    • Lu Liu,
    • Yanyi Huang,
    • and Yi Qin Gao
    Genome Res. August 2023 33: 1354-1368; Published in Advance July 25, 2023, doi:10.1101/gr.277737.123
  9. Method: Characterization of network hierarchy reflects cell state specificity in genome organization
    • Jingyao Wang,
    • Yue Xue,
    • Yueying He,
    • Hui Quan,
    • Jun Zhang,
    • and Yi Qin Gao
    Genome Res. February 2023 33: 247-260; Published in Advance February 24, 2023, doi:10.1101/gr.277206.122
  10. Resource: dbEmbryo multi-omics database for analyses of synergistic regulation in early mammalian embryo development
    • Xin Huang,
    • Xiaohan Tang,
    • Xuemei Bai,
    • Honglei Li,
    • Huan Tao,
    • Junting Wang,
    • Yaru Li,
    • Yu Sun,
    • Yang Zheng,
    • Xiang Xu,
    • Longteng Wang,
    • Yang Ding,
    • Meisong Lu,
    • Pingkun Zhou,
    • Xiaochen Bo,
    • Hao Li,
    • and Hebing Chen
    Genome Res. August 2022 32: 1612-1625; Published in Advance August 17, 2022, doi:10.1101/gr.276744.122
    OPEN ACCESS ARTICLE
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