Searching journal content for J R Smith in author.

Displaying results 1-10 of 23
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  1. Resource: A systems view on DNA damage response kinetics in Tetrahymena
    • Emily Nischwitz,
    • Vivien Schoonenberg,
    • Rachel Mullner,
    • Albert Fradera-Sola,
    • Susanne Zimbelmann,
    • Joshua J Smith,
    • and Falk Butter
    Genome Res. January 28, 2026 gr.281000.125; Published in Advance January 28, 2026, doi:10.1101/gr.281000.125
    ACCEPTED MANUSCRIPT
  2. Method: Accurate estimation of intraspecific microbial gene content variation in metagenomic data with MIDAS v3 and StrainPGC
    • Byron J. Smith,
    • Chunyu Zhao,
    • Veronika Dubinkina,
    • Xiaofan Jin,
    • Liron Zahavi,
    • Saar Shoer,
    • Jacqueline Moltzau-Anderson,
    • Eran Segal,
    • and Katherine S. Pollard
    Genome Res. May 2025 35: 1247-1260; Published in Advance April 10, 2025, doi:10.1101/gr.279543.124
    OPEN ACCESS ARTICLE
  3. Method: Pooled analysis of radiation hybrids identifies loci for growth and drug action in mammalian cells
    • Arshad H. Khan,
    • Andy Lin,
    • Richard T. Wang,
    • Joshua S. Bloom,
    • Kenneth Lange,
    • and Desmond J. Smith
    Genome Res. October 2020 30: 1458-1467; Published in Advance September 2, 2020, doi:10.1101/gr.262204.120
  4. Method: Improved discovery of genetic interactions using CRISPRiSeq across multiple environments
    • Mia Jaffe,
    • Adam Dziulko,
    • Justin D. Smith,
    • Robert P. St.Onge,
    • Sasha F. Levy,
    • and Gavin Sherlock
    Genome Res. April 2019 29: 668-681; Published in Advance February 19, 2019, doi:10.1101/gr.246603.118
    OPEN ACCESS ARTICLE
  5. Resource: A chromosome-scale assembly of the axolotl genome
    • Jeramiah J. Smith,
    • Nataliya Timoshevskaya,
    • Vladimir A. Timoshevskiy,
    • Melissa C. Keinath,
    • Drew Hardy,
    • and S. Randal Voss
    Genome Res. February 2019 29: 317-324; Published in Advance January 24, 2019, doi:10.1101/gr.241901.118
  6. Research: The sea lamprey meiotic map improves resolution of ancient vertebrate genome duplications
    • Jeramiah J. Smith and
    • Melissa C. Keinath
    Genome Res. August 2015 25: 1081-1090; Published in Advance June 5, 2015, doi:10.1101/gr.184135.114
  7. Research: Origin of amphibian and avian chromosomes by fission, fusion, and retention of ancestral chromosomes
    • Stephen R. Voss,
    • D. Kevin Kump,
    • Srikrishna Putta,
    • Nathan Pauly,
    • Anna Reynolds,
    • Rema J. Henry,
    • Saritha Basa,
    • John A. Walker,
    • and Jeramiah J. Smith
    Genome Res. August 2011 21: 1306-1312; Published in Advance April 11, 2011, doi:10.1101/gr.116491.110
  8. Research: De novo rates and selection of large copy number variation
    • Andy Itsara,
    • Hao Wu,
    • Joshua D. Smith,
    • Deborah A. Nickerson,
    • Isabelle Romieu,
    • Stephanie J. London,
    • and Evan E. Eichler
    Genome Res. November 2010 20: 1469-1481; Published in Advance September 14, 2010, doi:10.1101/gr.107680.110
  9. Method: A genome-wide map of human genetic interactions inferred from radiation hybrid genotypes
    • Andy Lin,
    • Richard T. Wang,
    • Sangtae Ahn,
    • Christopher C. Park,
    • and Desmond J. Smith
    Genome Res. August 2010 20: 1122-1132; Published in Advance May 27, 2010, doi:10.1101/gr.104216.109
  10. Methods: A method for rapid, targeted CNV genotyping identifies rare variants associated with neurocognitive disease
    • Heather C. Mefford,
    • Gregory M. Cooper,
    • Troy Zerr,
    • Joshua D. Smith,
    • Carl Baker,
    • Neil Shafer,
    • Erik C. Thorland,
    • Cindy Skinner,
    • Charles E. Schwartz,
    • Deborah A. Nickerson,
    • and Evan E. Eichler
    Genome Res. September 2009 19: 1579-1585; Published in Advance June 8, 2009, doi:10.1101/gr.094987.109
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