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J Lu
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Displaying results 1-10 of
13
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Method
:
Highly accurate assembly polishing with DeepPolisher
Mira Mastoras
,
Mobin Asri
,
Lucas Brambrink
,
Prajna Hebbar
,
Alexey Kolesnikov
,
Daniel E. Cook
,
Maria Nattestad
,
Julian Lucas
,
Taylor S. Won
,
Pi-Chuan Chang
,
Andrew Carroll
,
Benedict Paten
,
Kishwar Shafin
,
and
and the Human Pangenome Reference Consortium
Genome Res.
July 2025
35
:
1595
-
1608
;
Published in Advance
May 19, 2025
,
doi:
10.1101/gr.280149.124
Abstract
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Research
:
Semiconservative transmission of DNA
N
6
-adenine methylation in a unicellular eukaryote
Yalan Sheng
,
Yuanyuan Wang
,
Wentao Yang
,
Xue Qing Wang
,
Jiuwei Lu
,
Bo Pan
,
Bei Nan
,
Yongqiang Liu
,
Fei Ye
,
Chun Li
,
Jikui Song
,
Yali Dou
,
Shan Gao
,
and
Yifan Liu
Genome Res.
May 2024
34
:
740
-
756
;
Published in Advance
May 14, 2024
,
doi:
10.1101/gr.277843.123
Abstract
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Research
:
Novel determinants of mammalian primary microRNA processing revealed by systematic evaluation of hairpin-containing transcripts and human genetic variation
Christine Roden
,
Jonathan Gaillard
,
Shaveta Kanoria
,
William Rennie
,
Syndi Barish
,
Jijun Cheng
,
Wen Pan
,
Jun Liu
,
Chris Cotsapas
,
Ye Ding
,
and
Jun Lu
Genome Res.
March 2017
27
:
374
-
384
;
Published in Advance
January 13, 2017
,
doi:
10.1101/gr.208900.116
Abstract
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Method
:
An integrative variant analysis pipeline for accurate genotype/haplotype inference in population NGS data
Yi Wang
,
James Lu
,
Jin Yu
,
Richard A. Gibbs
,
and
Fuli Yu
Genome Res.
May 2013
23
:
833
-
842
;
Published in Advance
January 7, 2013
,
doi:
10.1101/gr.146084.112
Abstract
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Resource
:
A large-scale zebrafish gene knockout resource for the genome-wide study of gene function
Gaurav K. Varshney
,
Jing Lu
,
Derek E. Gildea
,
Haigen Huang
,
Wuhong Pei
,
Zhongan Yang
,
Sunny C. Huang
,
David Schoenfeld
,
Nam H. Pho
,
David Casero
,
Takashi Hirase
,
Deborah Mosbrook-Davis
,
Suiyuan Zhang
,
Li-En Jao
,
Bo Zhang
,
Ian G. Woods
,
Steven Zimmerman
,
Alexander F. Schier
,
Tyra G. Wolfsberg
,
Matteo Pellegrini
,
Shawn M. Burgess
,
and
Shuo Lin
Genome Res.
April 2013
23
:
727
-
735
;
Published in Advance
February 4, 2013
,
doi:
10.1101/gr.151464.112
Abstract
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Resource
:
SOAPindel: Efficient identification of indels from short paired reads
Shengting Li
,
Ruiqiang Li
,
Heng Li
,
Jianliang Lu
,
Yingrui Li
,
Lars Bolund
,
Mikkel H. Schierup
,
and
Jun Wang
Genome Res.
January 2013
23
:
195
-
200
;
Published in Advance
September 12, 2012
,
doi:
10.1101/gr.132480.111
Abstract
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Research
:
Impact of microRNA regulation on variation in human gene expression
Jian Lu
and
Andrew G. Clark
Genome Res.
July 2012
22
:
1243
-
1254
;
Published in Advance
March 28, 2012
,
doi:
10.1101/gr.132514.111
Abstract
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Research
:
Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
Tyrone Ryba
,
Ichiro Hiratani
,
Junjie Lu
,
Mari Itoh
,
Michael Kulik
,
Jinfeng Zhang
,
Thomas C. Schulz
,
Allan J. Robins
,
Stephen Dalton
,
and
David M. Gilbert
Genome Res.
June 2010
20
:
761
-
770
;
Published in Advance
April 29, 2010
,
doi:
10.1101/gr.099655.109
Abstract
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Letter
:
Population dynamics of PIWI-interacting RNAs (piRNAs) and their targets in
Drosophila
Jian Lu
and
Andrew G. Clark
Genome Res.
February 2010
20
:
212
-
227
;
Published in Advance
November 30, 2009
,
doi:
10.1101/gr.095406.109
Abstract
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LETTER
:
Assessing the limits of genomic data integration for predicting protein networks
Long J. Lu
,
Yu Xia
,
Alberto Paccanaro
,
Haiyuan Yu
,
and
Mark Gerstein
Genome Res.
July 2005
15
:
945
-
953
;
doi:
10.1101/gr.3610305
Abstract
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