Searching journal content for Ivan Ovcharenko in author.

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  1. Corrigendum: Corrigendum: Enhancer–silencer transitions in the human genome
    • Di Huang and
    • Ivan Ovcharenko
    Genome Res. June 2022 32: 1228_2; doi:10.1101/gr.276950.122
    OPEN ACCESS ARTICLE
  2. Research: Enhancer–silencer transitions in the human genome
    • Di Huang and
    • Ivan Ovcharenko
    Genome Res. March 2022 32: 437-448; Published in Advance February 1, 2022, doi:10.1101/gr.275992.121
    OPEN ACCESS ARTICLE
  3. Method: Identification of human silencers by correlating cross-tissue epigenetic profiles and gene expression
    • Di Huang,
    • Hanna M. Petrykowska,
    • Brendan F. Miller,
    • Laura Elnitski,
    • and Ivan Ovcharenko
    Genome Res. April 2019 29: 657-667; Published in Advance March 18, 2019, doi:10.1101/gr.247007.118
    OPEN ACCESS ARTICLE
  4. Method: Systematic elucidation and in vivo validation of sequences enriched in hindbrain transcriptional control
    • Grzegorz M. Burzynski,
    • Xylena Reed,
    • Leila Taher,
    • Zachary E. Stine,
    • Takeshi Matsui,
    • Ivan Ovcharenko,
    • and Andrew S. McCallion
    Genome Res. November 2012 22: 2278-2289; Published in Advance July 3, 2012, doi:10.1101/gr.139717.112
    OPEN ACCESS ARTICLE
  5. Method: Genome-wide identification of conserved regulatory function in diverged sequences
    • Leila Taher,
    • David M. McGaughey,
    • Samantha Maragh,
    • Ivy Aneas,
    • Seneca L. Bessling,
    • Webb Miller,
    • Marcelo A. Nobrega,
    • Andrew S. McCallion,
    • and Ivan Ovcharenko
    Genome Res. July 2011 21: 1139-1149; Published in Advance May 31, 2011, doi:10.1101/gr.119016.110
    OPEN ACCESS ARTICLE
  6. Research: Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers
    • Valer Gotea,
    • Axel Visel,
    • John M. Westlund,
    • Marcelo A. Nobrega,
    • Len A. Pennacchio,
    • and Ivan Ovcharenko
    Genome Res. May 2010 20: 565-577; Published in Advance April 2, 2010, doi:10.1101/gr.104471.109
    OPEN ACCESS ARTICLE
  7. Methods: Genome-wide discovery of human heart enhancers
    • Leelavati Narlikar,
    • Noboru J. Sakabe,
    • Alexander A. Blanski,
    • Fabio E. Arimura,
    • John M. Westlund,
    • Marcelo A. Nobrega,
    • and Ivan Ovcharenko
    Genome Res. March 2010 20: 381-392; Published in Advance January 14, 2010, doi:10.1101/gr.098657.109
    OPEN ACCESS ARTICLE
  8. LETTER: Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions
    • Laurie Gordon,
    • Shan Yang,
    • Mary Tran-Gyamfi,
    • Dan Baggott,
    • Mari Christensen,
    • Aaron Hamilton,
    • Richard Crooijmans,
    • Martien Groenen,
    • Susan Lucas,
    • Ivan Ovcharenko,
    • and Lisa Stubbs
    Genome Res. November 2007 17: 1603-1613; Published in Advance October 5, 2007, doi:10.1101/gr.6775107
  9. Methods: Predicting tissue-specific enhancers in the human genome
    • Len A. Pennacchio,
    • Gabriela G. Loots,
    • Marcelo A. Nobrega,
    • and Ivan Ovcharenko
    Genome Res. February 2007 17: 201-211; Published in Advance January 8, 2007, doi:10.1101/gr.5972507
    OPEN ACCESS ARTICLE
  10. LETTER: Identification of clustered YY1 binding sites in imprinting control regions
    • Jeong Do Kim,
    • Angela K. Hinz,
    • Anne Bergmann,
    • Jennifer M. Huang,
    • Ivan Ovcharenko,
    • Lisa Stubbs,
    • and Joomyeong Kim
    Genome Res. July 2006 16: 901-911; Published in Advance June 7, 2006, doi:10.1101/gr.5091406
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